Detailed information NTG0404844

Bioinformatically predicted

Overview

• Name: amiF
• Type: Regulator
• Locus tag: GE024_RS01890
• Genome accession: NZ_CP046521
• Coordinates: 355504..356427 (+)
• Length: 307 a.a.
• NCBI ID: WP_156667672.1
• Uniprot ID: -
• Organism: Streptococcus canis strain HL_100
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 350504..361427

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GE024_RS01875 (GE024_01870)	amiC	352004..353506 (+)	1503	WP_003046676.1	ABC transporter permease	Regulator
GE024_RS01880 (GE024_01875)	amiD	353506..354432 (+)	927	WP_093999415.1	oligopeptide ABC transporter permease OppC	Regulator
GE024_RS01885 (GE024_01880)	amiE	354441..355511 (+)	1071	WP_093999414.1	ABC transporter ATP-binding protein	Regulator
GE024_RS01890 (GE024_01885)	amiF	355504..356427 (+)	924	WP_156667672.1	ABC transporter ATP-binding protein	Regulator
GE024_RS01895 (GE024_01890)	-	356649..357600 (-)	952	Protein_320	IS30 family transposase	-

Sequence

Protein

• Length: 307 a.a.
• Molecular weight: 34693.00 Da
• Isoelectric Point: 7.1463

>NTDB_id=404844 GE024_RS01890 WP_156667672.1 355504..356427(+) (amiF) [Streptococcus canis strain HL_100]
MSEKLVEVKDLEISFGEGKKKFVVVKNANFFIKKGETFSLVGESGSGKTTIGRAIIGLNDTSSGQILYDGKVINGRKSKS
EANELIRKIQMIFQDPAASLNERATVDYIISEGLYNFNLFKTEEERKEKIKTMMAEVGLLSEHLTRYPHEFSGGQRQRIG
IARALVMNPEFVIADEPISALDVSVRAQVLNLLKRMQAEKGLTYLFIAHDLSVVRFISDRIAVIHKGVIVEVAETEELFN
NPIHPYTKSLLSAVPIPDPILERQKELVVYNPDQHDYTVDKPSMVEIKPNHFVWANQAEIKKYQKEL

Nucleotide

• Length: 924 bp

>NTDB_id=404844 GE024_RS01890 WP_156667672.1 355504..356427(+) (amiF) [Streptococcus canis strain HL_100]
ATGTCTGAGAAGTTAGTCGAAGTTAAAGACCTAGAAATTTCCTTTGGAGAGGGAAAGAAAAAATTTGTTGTGGTTAAGAA
TGCCAATTTCTTCATTAAAAAAGGGGAAACCTTCTCTTTAGTTGGAGAATCTGGTAGCGGAAAAACAACCATTGGTCGGG
CCATTATTGGCTTGAATGATACCAGTTCAGGGCAAATTCTTTACGATGGTAAAGTAATTAATGGTAGAAAATCTAAATCA
GAAGCCAATGAACTTATACGTAAAATTCAAATGATTTTCCAAGATCCTGCTGCTAGTTTAAATGAACGTGCAACTGTTGA
TTATATCATTTCGGAAGGTCTCTATAACTTTAATCTGTTTAAAACAGAGGAAGAACGTAAAGAAAAAATTAAGACGATGA
TGGCTGAAGTTGGCCTGCTGTCAGAGCATCTGACTCGCTACCCACATGAATTTTCGGGAGGTCAACGCCAGCGGATTGGT
ATTGCCAGAGCCTTAGTGATGAATCCTGAATTCGTTATTGCTGATGAGCCTATCTCAGCTTTAGATGTCTCTGTTCGAGC
ACAAGTCCTAAATCTTCTTAAAAGAATGCAGGCAGAAAAAGGGCTCACTTATCTTTTCATCGCCCATGACCTTTCCGTTG
TTCGATTCATTTCAGATCGTATTGCGGTTATTCACAAAGGAGTTATTGTGGAGGTTGCAGAAACAGAAGAATTATTTAAT
AATCCTATCCATCCTTACACAAAATCTCTGCTGTCAGCCGTTCCTATTCCTGATCCGATTTTAGAACGTCAAAAAGAACT
TGTTGTTTATAATCCAGATCAGCATGATTATACCGTAGATAAGCCATCAATGGTTGAAATCAAACCAAATCACTTTGTTT
GGGCAAACCAAGCAGAAATTAAAAAGTATCAAAAAGAATTGTAA

Domains

Predicted by InterproScan.

• ABC transporter (ABC_tran) (25-178)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (230-262)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiF	Streptococcus thermophilus LMG 18311	82.353	99.674	0.821
amiF	Streptococcus thermophilus LMD-9	82.026	99.674	0.818
amiF	Streptococcus salivarius strain HSISS4	82.026	99.674	0.818