Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   GII82_RS07600 Genome accession   NZ_CP045819
Coordinates   1464147..1464611 (-) Length   154 a.a.
NCBI ID   WP_003232406.1    Uniprot ID   G4NVM0
Organism   Bacillus subtilis strain MB9_B4     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1459147..1469611
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GII82_RS07580 (GII82_07580) kinA 1459614..1461434 (+) 1821 WP_015252197.1 sporulation histidine kinase KinA -
  GII82_RS07585 (GII82_07585) dapX 1461444..1462625 (-) 1182 WP_014476653.1 aminotransferase A -
  GII82_RS07590 (GII82_07590) - 1462827..1462988 (-) 162 WP_003245246.1 hypothetical protein -
  GII82_RS07595 (GII82_07595) cheV 1463192..1464103 (+) 912 WP_029727006.1 chemotaxis protein CheV -
  GII82_RS07600 (GII82_07600) kre 1464147..1464611 (-) 465 WP_003232406.1 YkyB family protein Regulator
  GII82_RS07605 (GII82_07605) ykuC 1464737..1466029 (-) 1293 WP_029727007.1 MFS transporter -
  GII82_RS07610 (GII82_07610) ltdD 1466105..1466599 (-) 495 WP_072174092.1 L,D-transpeptidase family protein -
  GII82_RS07615 (GII82_07615) ppeE 1466651..1467514 (-) 864 WP_029727008.1 metallophosphoesterase -
  GII82_RS07620 (GII82_07620) fadH 1467657..1468421 (+) 765 WP_029727009.1 2,4-dienoyl-CoA reductase -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17895.71 Da        Isoelectric Point: 10.3545

>NTDB_id=397889 GII82_RS07600 WP_003232406.1 1464147..1464611(-) (kre) [Bacillus subtilis strain MB9_B4]
MDDHAYTKDLQPTVENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSKNPRFSQQQSDVLISIGD
YYFHMPPTKEDFEHLPHLGTLNQSYRNPKAQMSLTKAKHLLQEYVGMKEKPLVPNRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=397889 GII82_RS07600 WP_003232406.1 1464147..1464611(-) (kre) [Bacillus subtilis strain MB9_B4]
ATGGACGACCATGCATATACGAAAGATCTGCAGCCAACCGTAGAAAATCTTTCAAAAGCAGTTTACACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTATATCTGCTGAAAAAACGGGCTTTGCAAAAGCTTGTCAAAGAAGGTAAAG
GAAAGAAAATAGGGCTTCATTTTTCAAAAAATCCAAGGTTCAGCCAACAGCAATCGGACGTGCTTATCTCAATCGGAGAC
TACTATTTTCACATGCCTCCAACTAAAGAAGACTTCGAACATCTTCCGCATTTAGGTACACTTAATCAATCGTACCGAAA
TCCTAAAGCTCAAATGTCTTTAACAAAAGCGAAACACCTATTGCAAGAATATGTCGGCATGAAAGAAAAGCCGCTAGTGC
CAAATCGCCAGCAGCCAGCTTACCATAAACCGGTCTTTAAAAAACTTGGCGAGAGTTACTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVM0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment