Detailed information
Bioinformatically predicted
Overview
| Name | pilE | Type | Machinery gene |
| Locus tag | GCB94_RS14325 | Genome accession | NZ_CP045306 |
| Coordinates | 3013949..3014368 (+) | Length | 139 a.a. |
| NCBI ID | WP_003635608.1 | Uniprot ID | D3HKN8 |
| Organism | Legionella longbeachae strain B1445CHC | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3008949..3019368
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GCB94_RS14315 (GCB94_14250) | - | 3009875..3010444 (+) | 570 | WP_012979330.1 | pilus assembly protein | - |
| GCB94_RS14320 (GCB94_14255) | - | 3010457..3013936 (+) | 3480 | WP_003635609.1 | PilC/PilY family type IV pilus protein | - |
| GCB94_RS14325 (GCB94_14260) | pilE | 3013949..3014368 (+) | 420 | WP_003635608.1 | type IV pilin protein | Machinery gene |
| GCB94_RS14330 (GCB94_14265) | - | 3014655..3015293 (-) | 639 | WP_003635606.1 | hypothetical protein | - |
| GCB94_RS14335 (GCB94_14270) | - | 3015535..3016560 (-) | 1026 | WP_003635604.1 | spermidine/putrescine ABC transporter substrate-binding protein | - |
| GCB94_RS14340 (GCB94_14275) | - | 3016557..3017324 (-) | 768 | WP_003635601.1 | ABC transporter permease subunit | - |
| GCB94_RS14345 (GCB94_14280) | - | 3017321..3018145 (-) | 825 | WP_003635599.1 | ABC transporter permease subunit | - |
| GCB94_RS14350 (GCB94_14285) | potA | 3018135..3019229 (-) | 1095 | WP_003635598.1 | spermidine/putrescine ABC transporter ATP-binding protein PotA | - |
Sequence
Protein
Download Length: 139 a.a. Molecular weight: 15313.53 Da Isoelectric Point: 7.5805
>NTDB_id=393324 GCB94_RS14325 WP_003635608.1 3013949..3014368(+) (pilE) [Legionella longbeachae strain B1445CHC]
MKQPRINGFTLIDLMIALVVMAILVTIAYPYYVGFLLKTRRSDALATLAQDQIYLERCYAQNFSYNTCTSLPAFPQISAQ
GFYSITLSNLGPTTYTLTATPRGSQTEDTTCARMTVDQANVKTAVDSSGTTQTICWNPS
MKQPRINGFTLIDLMIALVVMAILVTIAYPYYVGFLLKTRRSDALATLAQDQIYLERCYAQNFSYNTCTSLPAFPQISAQ
GFYSITLSNLGPTTYTLTATPRGSQTEDTTCARMTVDQANVKTAVDSSGTTQTICWNPS
Nucleotide
Download Length: 420 bp
>NTDB_id=393324 GCB94_RS14325 WP_003635608.1 3013949..3014368(+) (pilE) [Legionella longbeachae strain B1445CHC]
ATGAAACAACCTCGAATAAATGGTTTTACCTTAATTGATTTAATGATAGCTTTAGTGGTTATGGCGATACTGGTGACTAT
TGCCTATCCCTATTACGTGGGTTTTTTGCTAAAAACACGACGTTCTGATGCTTTGGCCACACTAGCCCAAGATCAAATCT
ATCTTGAACGCTGCTATGCACAAAATTTTTCTTATAATACATGCACATCCTTACCCGCATTTCCGCAAATATCGGCGCAA
GGATTCTACAGCATCACCCTAAGTAATCTTGGGCCGACAACATATACCCTCACGGCAACACCGCGAGGAAGCCAGACCGA
AGATACGACATGTGCACGTATGACAGTGGATCAAGCCAACGTAAAAACCGCGGTAGATTCCTCAGGAACTACGCAAACTA
TTTGTTGGAATCCTTCATGA
ATGAAACAACCTCGAATAAATGGTTTTACCTTAATTGATTTAATGATAGCTTTAGTGGTTATGGCGATACTGGTGACTAT
TGCCTATCCCTATTACGTGGGTTTTTTGCTAAAAACACGACGTTCTGATGCTTTGGCCACACTAGCCCAAGATCAAATCT
ATCTTGAACGCTGCTATGCACAAAATTTTTCTTATAATACATGCACATCCTTACCCGCATTTCCGCAAATATCGGCGCAA
GGATTCTACAGCATCACCCTAAGTAATCTTGGGCCGACAACATATACCCTCACGGCAACACCGCGAGGAAGCCAGACCGA
AGATACGACATGTGCACGTATGACAGTGGATCAAGCCAACGTAAAAACCGCGGTAGATTCCTCAGGAACTACGCAAACTA
TTTGTTGGAATCCTTCATGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilE | Legionella pneumophila str. Paris |
59.574 |
100 |
0.604 |
| pilE | Legionella pneumophila strain ERS1305867 |
59.574 |
100 |
0.604 |