Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   F9Z45_RS18015 Genome accession   NZ_CP044975
Coordinates   3854095..3854490 (-) Length   131 a.a.
NCBI ID   WP_201449985.1    Uniprot ID   -
Organism   Hydrogenophaga sp. PBL-H3 substr. PBL-H3(B2)     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3849095..3859490
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  F9Z45_RS18000 (F9Z45_17990) - 3850836..3853088 (-) 2253 WP_159608084.1 methyl-accepting chemotaxis protein -
  F9Z45_RS18005 (F9Z45_17995) - 3853151..3853702 (-) 552 WP_159608085.1 chemotaxis protein CheW -
  F9Z45_RS18010 (F9Z45_18000) - 3853730..3854095 (-) 366 WP_159608086.1 response regulator -
  F9Z45_RS18015 (F9Z45_18005) pilG 3854095..3854490 (-) 396 WP_201449985.1 response regulator Regulator
  F9Z45_RS18020 (F9Z45_18010) - 3854586..3854759 (-) 174 WP_159608087.1 rubredoxin -
  F9Z45_RS18025 (F9Z45_18015) - 3854914..3855855 (+) 942 WP_159608088.1 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase -
  F9Z45_RS18030 (F9Z45_18020) hemL 3855913..3857220 (+) 1308 WP_159608089.1 glutamate-1-semialdehyde 2,1-aminomutase -
  F9Z45_RS18035 (F9Z45_18025) purH 3857288..3858874 (-) 1587 WP_159608090.1 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase -
  F9Z45_RS18040 (F9Z45_18030) - 3858912..3859148 (-) 237 WP_159608091.1 helix-turn-helix domain-containing protein -

Sequence

Protein


Download         Length: 131 a.a.        Molecular weight: 14306.52 Da        Isoelectric Point: 6.9485

>NTDB_id=391076 F9Z45_RS18015 WP_201449985.1 3854095..3854490(-) (pilG) [Hydrogenophaga sp. PBL-H3 substr. PBL-H3(B2)]
MSPTPALKVLVVDDSNTIRRSAEIFLKQGGHEVLLADDGFDALAKINDYQPDLVFCDILMPRLDGYQTCAIIKRNAKFAS
IPVVMLSSKDGVFDKARGRMVGSQDYLTKPFTKDQLLQAVQQFGANLAGAA

Nucleotide


Download         Length: 396 bp        

>NTDB_id=391076 F9Z45_RS18015 WP_201449985.1 3854095..3854490(-) (pilG) [Hydrogenophaga sp. PBL-H3 substr. PBL-H3(B2)]
GTGAGCCCAACACCTGCCCTGAAAGTCCTGGTCGTCGACGACAGCAACACCATCCGGCGCAGCGCCGAAATCTTTCTCAA
GCAGGGTGGACATGAGGTCCTGCTGGCCGACGATGGTTTTGACGCGCTGGCCAAAATCAACGACTACCAACCCGACCTGG
TCTTCTGCGACATCCTGATGCCTCGCCTTGACGGGTATCAGACCTGCGCCATCATCAAGCGCAACGCCAAGTTCGCCAGC
ATCCCTGTTGTCATGCTGTCTTCCAAGGACGGCGTCTTTGACAAGGCCCGCGGACGCATGGTGGGCTCCCAGGATTACCT
CACCAAACCCTTCACCAAAGACCAACTGCTGCAAGCCGTGCAGCAGTTCGGCGCCAACCTAGCCGGAGCTGCATGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(9-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

62.931

88.55

0.557
  pilH Synechocystis sp. PCC 6803

40.678

90.076

0.366

Multiple sequence alignment