Detailed information NTG0388760

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: F6X00_RS06965
• Genome accession: NZ_CP044206
• Coordinates: 1482108..1485497 (-)
• Length: 1129 a.a.
• NCBI ID: WP_157401726.1
• Uniprot ID: -
• Organism: Vibrio vulnificus strain Vv180806
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 1477108..1490497

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
F6X00_RS06950 (F6X00_07075)	-	1477311..1478336 (-)	1026	WP_011079591.1	ABC transporter permease	-
F6X00_RS06955 (F6X00_07080)	-	1478339..1479325 (-)	987	WP_011079592.1	ABC transporter permease	-
F6X00_RS06960 (F6X00_07085)	-	1479494..1481167 (-)	1674	WP_045618650.1	ABC transporter substrate-binding protein	-
F6X00_RS06965 (F6X00_07090)	chiS	1482108..1485497 (-)	3390	WP_157401726.1	response regulator	Regulator
F6X00_RS06970 (F6X00_07095)	rsmC	1485744..1486766 (-)	1023	WP_182290703.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
F6X00_RS06975 (F6X00_07100)	-	1486840..1487925 (-)	1086	WP_011079596.1	AI-2E family transporter	-
F6X00_RS06980 (F6X00_07105)	hemL	1488175..1489470 (-)	1296	WP_182290705.1	glutamate-1-semialdehyde 2,1-aminomutase	-
F6X00_RS06985 (F6X00_07110)	erpA	1489757..1490098 (+)	342	WP_026130638.1	iron-sulfur cluster insertion protein ErpA	-

Sequence

Protein

• Length: 1129 a.a.
• Molecular weight: 127463.42 Da
• Isoelectric Point: 5.8920

>NTDB_id=388760 F6X00_RS06965 WP_157401726.1 1482108..1485497(-) (chiS) [Vibrio vulnificus strain Vv180806]
MFKFYRKQKFKRLQSTLMTAFLVLSITPLTITAIFFLQSHSKDLQEQSTSHLLSVRDTKQQQILDYFQAQETEVMGFVRS
ELAYASGGRFYGLVNAFKSLGVDMEQARENAQQRYIQGSGDQIKTSILPESSSFVGSERYRLLHKRYHWAYLELLKRSDF
DDILLVDLDGNVTYSIYKNENFGTNLIEGPFKESMLGKSFRQLANDVSEKRKQNEDYTPVYISDFSVEDGKQVAWLGAPI
IQQGYLHSYAMFRLPNNGITKLIADINKDAAIHTLLVGSDHLPRTMTTKQTDIESSIEVVDKALAGLTDVGTYVNSSGEA
TIAAYAPISFKGQTWALVVQLPEKEAFARIHQLEKLFVIAMLIAIVLVFISSHYLSNFITSPLLKLTWAAERVSAGDLDE
NMINTERKDEIGRLAISFERMQRSIRDKIQLIKTQNAELEKNLQLIQKQNDELQLADKLKDEFLATTSHELRTPLHGMIG
IAETLISGANGPLPSNQRYQLDIIIKSGQRLATLVDDLLDYHKMRYGSLDIQKSAVNLASATRLVLELSHHLLGNKTLRI
INQVSNDVAPVSADPQRLEQVLYNLIGNAIKYTTEGKIVISANVVDDKVRVQVVDTGQGIPAEQLEHIFEPLIQAGRDSG
RYRQGAGLGLSISRQLIELMGGSLYVSSQPMVGTTFSFTLPLASADEISATEVMQNQHHFQAPDSNELISLDNSSLPENP
NGPLLIVADDEPVNLRVLESFLRIEGYRVQTASDGPDTLELIEHEKPALLLLDIMMPGMSGYQVCHQLRQQYDMAELPII
MLTALSQSEDRVRGFEAGANDYLTKPFNKQELAARIKAHLMASKAEARRLENNRLEAELRQRAMVEASLLETQGRLLEQL
ESAPEAIICIREDKRIRFANDAACKLFKRSLEQLKRSNAEELIAPKYLTVKQQHYCGNIDIYVDDVRQHIETDILKLPEG
SGLDAMFIFNVGGGAAASRVHNLETAVEVLSSYAFDGDKERLQSLKELGGEFTRLADKALGTNKNKQELMREVLVDLMTH
ALDYWESVTGENKFTFAEQSGLWRVYLDRSTLQTRTLDKYMRIETLPKTPRWRTVLSSIEYILEHCKEQSPERTYIEMQR
DKLQRLLTS

Nucleotide

• Length: 3390 bp

>NTDB_id=388760 F6X00_RS06965 WP_157401726.1 1482108..1485497(-) (chiS) [Vibrio vulnificus strain Vv180806]
ATGTTTAAGTTTTATCGCAAACAGAAGTTTAAACGCCTTCAAAGCACTCTGATGACTGCGTTTTTGGTGCTGAGTATCAC
GCCATTAACCATCACAGCGATTTTCTTTTTGCAATCACACAGTAAAGATCTCCAAGAGCAGAGCACTTCTCATCTGCTTT
CTGTTCGAGACACCAAGCAGCAACAGATCCTGGATTATTTCCAAGCACAAGAAACAGAAGTGATGGGATTTGTTCGTTCA
GAGTTGGCTTACGCGAGTGGTGGCCGATTTTACGGGCTTGTCAACGCCTTCAAAAGCTTAGGCGTGGATATGGAACAGGC
TCGAGAAAACGCTCAACAGCGCTATATTCAGGGGTCTGGCGATCAAATAAAAACGTCGATTTTGCCGGAATCCAGCTCTT
TTGTTGGTAGTGAACGCTACCGTTTACTGCATAAGCGCTATCACTGGGCCTATTTGGAGCTTTTGAAGCGCTCCGATTTT
GACGATATTTTGTTGGTGGATCTCGATGGCAACGTCACCTACTCCATCTACAAAAATGAAAACTTTGGCACAAACTTAAT
TGAAGGGCCTTTTAAAGAGAGCATGCTCGGTAAAAGCTTTCGTCAGTTGGCCAATGACGTCAGCGAAAAACGCAAGCAAA
ACGAAGACTATACCCCCGTCTATATTTCCGACTTCTCGGTTGAAGATGGCAAACAAGTCGCTTGGTTGGGTGCACCGATC
ATCCAGCAAGGCTATCTGCACAGCTACGCCATGTTCAGGCTACCCAACAATGGCATCACCAAACTGATTGCAGACATCAA
TAAAGATGCAGCTATCCACACTTTGCTGGTTGGAAGTGACCACTTACCTCGCACGATGACCACAAAGCAAACCGATATCG
AAAGCAGTATTGAAGTGGTCGATAAGGCACTCGCGGGACTGACGGATGTGGGGACTTATGTCAACAGCAGCGGTGAGGCG
ACCATCGCCGCCTATGCGCCAATTTCATTCAAGGGTCAAACCTGGGCTTTAGTGGTTCAGTTGCCGGAGAAAGAAGCGTT
TGCACGCATTCATCAGTTAGAAAAACTGTTCGTCATCGCTATGTTGATTGCAATCGTGCTGGTGTTTATCTCATCTCACT
ACTTATCGAATTTCATCACCTCACCACTACTCAAACTCACTTGGGCTGCAGAGCGCGTTTCTGCAGGTGATCTCGATGAA
AACATGATTAATACCGAGCGCAAAGACGAAATTGGCCGTTTAGCGATCAGTTTTGAACGAATGCAGCGCTCTATTCGCGA
TAAAATTCAGCTCATTAAAACGCAAAATGCGGAGCTAGAGAAAAATCTACAACTGATTCAAAAGCAAAATGACGAATTGC
AATTGGCCGATAAGCTCAAAGATGAATTTTTGGCAACGACCTCTCATGAGCTACGCACTCCACTGCATGGTATGATTGGT
ATTGCAGAAACCCTCATCTCAGGGGCAAACGGCCCACTGCCCTCCAACCAGCGCTATCAACTGGACATCATTATTAAGAG
TGGCCAGCGCTTAGCTACGCTTGTGGATGACTTGCTCGACTACCACAAAATGCGCTATGGCAGTTTGGATATTCAAAAAT
CCGCCGTCAATTTGGCCAGTGCGACTCGACTGGTATTAGAGCTCTCTCACCATTTATTGGGCAACAAAACTCTGCGCATC
ATTAATCAGGTTTCTAACGATGTTGCGCCGGTATCGGCCGATCCACAGCGATTAGAACAGGTGCTGTATAACCTTATTGG
CAACGCGATCAAATACACCACTGAAGGGAAAATCGTCATTTCCGCCAATGTGGTTGACGATAAAGTTCGAGTGCAAGTCG
TCGATACCGGCCAAGGCATTCCCGCAGAACAGTTAGAGCATATTTTCGAACCGCTCATTCAAGCTGGTCGCGACTCTGGT
CGTTATCGCCAAGGTGCCGGTCTGGGACTTTCCATTAGCCGTCAGCTGATCGAGTTAATGGGAGGATCGCTCTACGTCAG
CAGTCAACCCATGGTTGGTACCACCTTTAGCTTCACCTTGCCATTGGCCAGCGCAGACGAAATCAGTGCCACGGAAGTCA
TGCAAAATCAACATCACTTCCAAGCACCAGATAGCAATGAATTGATCTCATTAGATAATTCCTCACTGCCAGAGAATCCC
AATGGCCCGCTACTGATTGTGGCCGATGATGAACCCGTCAACTTACGCGTGCTTGAAAGTTTCCTACGCATCGAAGGGTA
CCGAGTGCAAACGGCCTCAGATGGCCCAGACACTCTCGAACTCATTGAACATGAAAAACCCGCCTTGCTGTTGCTCGACA
TCATGATGCCGGGCATGAGCGGTTATCAAGTTTGCCATCAACTCCGACAGCAATACGACATGGCAGAGTTGCCTATTATC
ATGCTAACGGCGTTGAGTCAGAGCGAAGATCGCGTGCGAGGATTCGAAGCTGGGGCCAATGATTACTTAACCAAACCATT
TAATAAGCAAGAGCTTGCGGCCCGAATTAAAGCACATTTAATGGCAAGTAAAGCAGAAGCTCGTCGCTTGGAAAACAATC
GCCTTGAAGCGGAGCTTCGCCAACGTGCAATGGTGGAAGCGAGCTTACTGGAAACACAAGGGCGTTTATTAGAACAATTG
GAGTCGGCCCCAGAAGCCATCATCTGTATTCGTGAAGATAAGCGTATTCGCTTTGCCAATGACGCGGCCTGTAAACTGTT
CAAACGTAGCTTAGAGCAGCTCAAGCGATCAAACGCAGAAGAACTTATTGCTCCCAAATATTTAACCGTCAAACAGCAGC
ACTATTGCGGCAATATCGATATCTATGTCGACGATGTTCGACAGCATATTGAAACGGATATCCTTAAACTACCAGAAGGG
TCTGGCCTTGATGCCATGTTTATCTTTAATGTCGGGGGAGGCGCTGCTGCTTCTCGTGTGCACAACCTAGAAACCGCCGT
GGAAGTCCTTTCAAGCTATGCCTTTGATGGTGACAAAGAGCGCTTACAGAGCCTCAAAGAGCTAGGGGGAGAATTTACTC
GCCTGGCCGACAAAGCGCTGGGTACCAATAAGAATAAGCAAGAGCTGATGCGTGAAGTCCTCGTGGATTTGATGACGCAT
GCACTCGATTATTGGGAGTCAGTGACAGGTGAAAACAAGTTTACCTTTGCTGAACAAAGTGGTTTATGGCGCGTTTATCT
CGACCGCAGCACGCTACAAACTCGCACACTTGATAAATACATGCGAATTGAAACCTTGCCAAAAACACCTCGTTGGAGAA
CCGTGTTGAGTTCTATTGAGTACATTCTGGAGCACTGTAAAGAGCAAAGTCCTGAGCGTACTTACATTGAGATGCAGCGA
GATAAATTACAACGCCTGCTCACCAGCTAA

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (726-837)

• His Kinase A (phospho-acceptor) domain (HisKA) (460-525)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (574-683)

• PAS fold (PAS) (877-926)

• HAMP domain (HAMP) (375-427)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	77.236	100	0.772