Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   F5K02_RS07530 Genome accession   NZ_CP044132
Coordinates   1455878..1456342 (-) Length   154 a.a.
NCBI ID   WP_003154622.1    Uniprot ID   A0A9Q3QIJ3
Organism   Bacillus amyloliquefaciens strain ZKY01     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1450878..1461342
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  F5K02_RS07510 (F5K02_07560) - 1451359..1453179 (+) 1821 WP_094032395.1 PAS domain-containing protein -
  F5K02_RS07515 (F5K02_07565) - 1453204..1454373 (-) 1170 WP_015417364.1 aminotransferase A -
  F5K02_RS07520 - 1454574..1454735 (-) 162 WP_007409608.1 hypothetical protein -
  F5K02_RS07525 (F5K02_07575) cheV 1454924..1455835 (+) 912 WP_007409609.1 chemotaxis protein CheV -
  F5K02_RS07530 (F5K02_07580) kre 1455878..1456342 (-) 465 WP_003154622.1 YkyB family protein Regulator
  F5K02_RS07535 (F5K02_07585) - 1456465..1457757 (-) 1293 WP_007611093.1 MFS transporter -
  F5K02_RS07540 (F5K02_07590) - 1457833..1458327 (-) 495 WP_241458339.1 L,D-transpeptidase family protein -
  F5K02_RS07545 (F5K02_07595) - 1458402..1459265 (-) 864 WP_094032397.1 metallophosphoesterase -
  F5K02_RS07550 (F5K02_07600) fadH 1459410..1460174 (+) 765 WP_015417368.1 2,4-dienoyl-CoA reductase -
  F5K02_RS07555 (F5K02_07605) - 1460288..1460836 (+) 549 WP_241458182.1 hypothetical protein -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17784.55 Da        Isoelectric Point: 10.4864

>NTDB_id=388090 F5K02_RS07530 WP_003154622.1 1455878..1456342(-) (kre) [Bacillus amyloliquefaciens strain ZKY01]
MDDHAYSKELQPTIENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSNNPRFSQQQSDVLISIGD
YYFHMPPTKEDFQHLPHLGTLNQSYRNPKAQMSLTKAKNVLQKYVGLKEKPLAANRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=388090 F5K02_RS07530 WP_003154622.1 1455878..1456342(-) (kre) [Bacillus amyloliquefaciens strain ZKY01]
ATGGACGACCACGCTTATTCGAAAGAGCTGCAGCCAACCATCGAGAATCTTTCAAAAGCTGTTTATACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTTTATCTGCTGAAAAAACGGGCATTACAAAAGCTTGTGAAAGAAGGCAAAG
GGAAAAAAATAGGGCTTCACTTTTCAAATAATCCCAGGTTTAGCCAACAGCAGTCAGACGTACTTATCTCTATCGGAGAC
TACTATTTTCACATGCCTCCAACAAAAGAAGACTTCCAGCATCTTCCGCATTTAGGTACGTTAAATCAATCGTACCGTAA
TCCTAAAGCACAAATGTCTTTGACAAAAGCGAAAAACGTATTGCAAAAATATGTGGGCTTAAAGGAAAAACCGCTTGCCG
CCAACAGGCAGCAGCCCGCTTATCATAAACCCGTATTTAAAAAACTTGGTGAGAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(13-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

92.857

100

0.929

Multiple sequence alignment