Detailed information    

insolico Bioinformatically predicted

Overview


Name   rcrQ   Type   Regulator
Locus tag   GPZ77_RS10820 Genome accession   NZ_CP046905
Coordinates   2366028..2367956 (+) Length   642 a.a.
NCBI ID   WP_158987051.1    Uniprot ID   -
Organism   Streptomyces sp. QHH-9511     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context


Location: 2361028..2372956
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  - rcrQ 2366028..2367956 (+) 1929 - - Regulator

Sequence


Protein


Download         Length: 642 a.a.        Molecular weight: 69181.48 Da        Isoelectric Point: 5.0528

>NTDB_id=356638 GPZ77_RS10820 WP_158987051.1 2366028..2367956(+) (rcrQ) [Streptomyces sp. QHH-9511]
MAGPGGRMMAGGGPDQRSMDFKGSGKRLLKQLAPERGALWLMLVAGVLSVAGAVVGPKILGKATDLVFAGVVGRQMPDGT
TKAQTIERLRREGDGGMADMLSGVDFTPGRGIDFTAVGEVLLWVLIIYVAAGLLMLVSTRMSIKVINRTVYRMREDVQAK
LARLPLSYFDKAKRGEVLSRATNDIDNISQTLQQSMGQLINSLLTIVGVMAMMFWISPLLALVALVTVPVSVVVATKVGK
RSQPHFVQQWRSTGKLNAHVEEMYTGHALVKVFGRQEESAADFREQNDALYEAGFKAQFNSGVMQPVMFFISNINYVLVA
VVGGLRVASGTLSIGDVQAFIQYSRQFSMPLTQVASMANLVQSGVASAERIFELLDAEEQEPDSPASERPSESLGKVALE
QVAFRYEADKPLIEDLSLTVEPGQTVAIVGPTGAGKTTLVNLLMRFYEVTGGRISLDGVDVATMSREDLRSGIGMVLQDT
WLFGGTIADNIAYGAGGEATREQIEEAAKAAHADRFIRTLPDGYDTVLDDEGSGVSAGEKQLITIARAFLSDPVILVLDE
ATSSVDTRTEVLIQKAMARLSHGRTSFVIAHRLSTIRDADVILVMENGRIVEQGTHEELLAAEGAYARLYAAQFAQAVAE
VD

Nucleotide


Download         Length: 1929 bp        

>NTDB_id=356638 GPZ77_RS10820 WP_158987051.1 2366028..2367956(+) (rcrQ) [Streptomyces sp. QHH-9511]
ATGGCCGGTCCTGGCGGACGAATGATGGCCGGCGGCGGCCCCGACCAGCGCTCCATGGACTTCAAGGGCTCGGGCAAGCG
GCTGCTGAAGCAGCTGGCGCCGGAGCGGGGCGCGCTGTGGCTGATGCTGGTCGCCGGTGTGCTGAGCGTCGCGGGCGCCG
TGGTCGGGCCGAAGATCCTCGGCAAGGCGACGGACCTGGTCTTCGCGGGTGTCGTCGGGCGGCAGATGCCCGACGGCACG
ACGAAAGCGCAGACGATCGAGAGGCTGCGGCGCGAGGGCGACGGCGGGATGGCGGACATGCTGTCCGGCGTCGACTTCAC
CCCCGGCCGTGGCATCGACTTCACCGCGGTCGGCGAAGTGCTCCTGTGGGTGCTGATCATCTACGTGGCGGCCGGGCTCC
TCATGCTGGTCTCCACCCGGATGTCGATCAAGGTGATCAACCGGACGGTCTACCGCATGCGCGAGGACGTCCAGGCGAAG
CTGGCACGGCTGCCGCTGTCGTACTTCGACAAGGCCAAGCGCGGTGAGGTCCTCAGCCGGGCGACCAATGACATCGACAA
CATCTCGCAGACCCTGCAGCAGTCGATGGGTCAGCTGATCAACTCACTGCTCACCATCGTCGGCGTGATGGCGATGATGT
TCTGGATCTCGCCGCTGCTCGCGCTGGTGGCGCTGGTGACCGTGCCGGTGTCGGTGGTCGTGGCGACGAAGGTCGGCAAG
CGGTCGCAGCCGCACTTCGTGCAGCAGTGGCGGTCCACGGGCAAGCTCAACGCCCATGTGGAGGAGATGTACACCGGCCA
TGCGCTGGTGAAGGTCTTCGGGCGGCAGGAGGAGTCGGCCGCCGACTTCCGCGAGCAGAACGACGCCTTGTACGAGGCGG
GGTTCAAGGCCCAGTTCAACAGCGGTGTCATGCAGCCGGTGATGTTCTTCATCTCGAACATCAACTATGTGCTCGTCGCG
GTCGTCGGCGGGCTGCGGGTGGCGTCGGGCACGCTGTCGATCGGTGACGTGCAGGCGTTCATCCAGTACTCCCGGCAGTT
CTCGATGCCGCTGACGCAGGTCGCGTCGATGGCGAACCTGGTCCAGTCGGGTGTCGCCTCGGCCGAGCGGATCTTCGAAC
TGCTCGACGCCGAGGAGCAGGAGCCGGACTCGCCGGCGAGCGAGAGGCCTTCGGAGTCGCTGGGCAAGGTGGCTCTGGAG
CAGGTGGCGTTCCGTTACGAGGCGGACAAGCCGTTGATCGAGGATCTGTCGCTGACGGTGGAGCCCGGACAGACGGTCGC
CATCGTCGGACCGACCGGCGCGGGCAAGACGACCCTGGTGAACCTCCTCATGCGGTTCTACGAGGTCACCGGCGGCCGGA
TCTCCCTCGACGGCGTCGACGTGGCCACCATGAGCCGCGAAGACCTCCGCTCCGGAATCGGCATGGTCCTCCAGGACACC
TGGCTCTTCGGCGGAACCATCGCCGACAACATCGCCTACGGCGCCGGCGGCGAGGCCACCAGGGAGCAGATCGAGGAAGC
CGCCAAGGCGGCCCACGCCGACCGGTTCATCCGCACCCTGCCCGACGGATACGACACCGTCCTCGACGACGAGGGCTCCG
GCGTCAGCGCCGGCGAGAAACAGCTCATCACCATCGCCCGCGCCTTCCTCTCCGACCCCGTCATCCTCGTCCTCGACGAA
GCCACCAGCTCCGTCGACACCCGCACCGAAGTCCTCATCCAAAAAGCCATGGCCCGCCTCTCCCACGGCCGCACCTCGTT
CGTCATCGCCCACCGCCTCTCCACCATCCGCGACGCCGACGTCATCCTCGTCATGGAGAACGGCAGAATCGTCGAACAGG
GAACGCACGAGGAGCTGTTGGCGGCCGAGGGTGCGTACGCGCGGCTGTACGCCGCCCAGTTCGCGCAGGCGGTCGCCGAA
GTCGACTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

40.777

96.262

0.393