Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   GPZ77_RS10815 Genome accession   NZ_CP046905
Coordinates   2364295..2366028 (+) Length   577 a.a.
NCBI ID   WP_158987049.1    Uniprot ID   -
Organism   Streptomyces sp. QHH-9511     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 2359295..2371028
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  - rcrP 2364295..2366028 (+) 1734 - - Regulator

Sequence

Protein


Download         Length: 577 a.a.        Molecular weight: 62950.27 Da        Isoelectric Point: 6.2017

>NTDB_id=356637 GPZ77_RS10815 WP_158987049.1 2364295..2366028(+) (rcrP) [Streptomyces sp. QHH-9511]
MLIRLLRTHLGPYKKPIALLVLLQFLQTCASLYLPTLNADIIDNGVVDGDTGYILRFGALMIAVSVLQVVCNIGAVYYGA
RTASALGRDVRAAVFGRVQSFSAREVGQFGAPSLITRTTNDVQQVQMLVLMAFTLMVSAPIMCVGGIVMALGQDVPLSGV
LLAVVPVLGISVSLIVKKMRPLFRTMQERLDTVNRVLREQITGNRVIRAFVKDAYERERFKVANTELTDVSMATGRLMAL
MFPTVMTVVNISSIAVVWFGAHRIDSGGMEIGALTAFLAYLMQIVMAVMMATFMFMMVPRAEVCAERIQEVLSTESSVVP
PAEPVRELRRRGHLEVRSADFRYPGAEESVLREVELVARPGETTAIIGSTGSGKSTLLGLVPRLFDVTGGEVLVDGVDVR
TLDPELIARTVGLVPQKPYLFSGTVATNLRYGKPDATDDELWHALEVAQAADFVKKLEHGLDAPIAQGGTNVSGGQRQRL
AIARTLVQRPEIYLFDDSFSALDYRTDALLREALKEETADATVVIVAQRVSTIRDADRIVVLDEGRVVGTGRHHELMAGN
ETYREIVLSQLTEAEAA

Nucleotide


Download         Length: 1734 bp        

>NTDB_id=356637 GPZ77_RS10815 WP_158987049.1 2364295..2366028(+) (rcrP) [Streptomyces sp. QHH-9511]
GTGCTCATAAGACTCCTCCGAACCCACCTGGGACCGTACAAGAAGCCCATCGCCCTGCTGGTGCTGCTGCAGTTCCTGCA
GACCTGCGCCTCCCTCTACCTGCCCACCCTGAACGCGGACATCATCGACAACGGTGTCGTGGACGGGGACACGGGTTACA
TCCTGCGGTTCGGTGCCCTGATGATCGCGGTCTCCGTGCTCCAGGTCGTCTGCAACATCGGCGCCGTGTACTACGGCGCG
CGGACCGCGTCCGCCCTCGGGCGGGACGTCCGCGCCGCCGTCTTCGGACGGGTGCAGTCCTTCTCGGCGCGGGAGGTCGG
GCAGTTCGGCGCCCCGTCGCTGATCACCCGTACCACCAACGACGTCCAGCAGGTCCAGATGCTGGTCCTGATGGCGTTCA
CGCTGATGGTGTCCGCGCCCATCATGTGTGTCGGCGGCATCGTCATGGCCCTCGGGCAGGACGTGCCCCTCTCCGGGGTG
CTGCTCGCCGTGGTGCCGGTACTCGGCATCTCGGTCTCGCTGATCGTGAAGAAGATGCGGCCGCTGTTCCGGACCATGCA
GGAGCGGCTCGACACGGTCAACCGGGTGCTGCGCGAGCAGATCACCGGCAACCGCGTGATCCGCGCGTTCGTGAAGGACG
CCTACGAACGCGAGCGGTTCAAGGTCGCCAACACCGAGCTGACGGACGTCTCGATGGCGACCGGGCGGCTGATGGCACTG
ATGTTCCCGACCGTGATGACGGTCGTGAACATCTCCAGCATCGCGGTGGTCTGGTTCGGCGCGCACCGGATCGACAGCGG
CGGGATGGAGATCGGCGCGCTCACCGCGTTCCTCGCCTATCTGATGCAGATCGTGATGGCCGTGATGATGGCCACCTTCA
TGTTCATGATGGTGCCGCGGGCCGAGGTGTGCGCCGAACGCATCCAGGAGGTCCTGTCCACCGAGAGCAGTGTCGTGCCG
CCGGCCGAGCCGGTGCGCGAGCTGCGGCGGCGTGGGCACCTGGAGGTCCGGAGCGCCGACTTCCGCTACCCGGGCGCCGA
GGAGTCGGTGCTGCGGGAGGTCGAGCTGGTCGCCCGGCCCGGTGAGACCACGGCGATCATCGGCTCGACGGGCAGCGGCA
AGTCCACCCTGCTCGGCCTGGTGCCGCGGCTCTTCGACGTGACCGGTGGCGAGGTCCTCGTCGACGGCGTGGACGTGCGG
ACGCTCGACCCCGAGCTGATCGCGCGGACCGTCGGACTCGTGCCCCAGAAGCCGTACCTCTTCTCCGGTACGGTCGCCAC
CAACCTGCGGTACGGAAAGCCCGACGCGACCGACGACGAGCTGTGGCACGCGCTGGAGGTCGCCCAGGCCGCCGACTTCG
TGAAGAAGCTCGAGCACGGTCTGGACGCGCCGATCGCGCAGGGCGGCACCAATGTCTCCGGCGGTCAGCGCCAGCGGCTC
GCCATCGCGCGGACGCTGGTGCAGCGGCCGGAGATCTACCTCTTCGACGACTCGTTCTCGGCGCTCGACTACCGGACGGA
CGCGTTGCTGAGAGAGGCACTCAAGGAGGAGACGGCCGACGCGACCGTCGTGATCGTCGCCCAGCGGGTGTCGACCATTC
GCGACGCCGACCGGATCGTGGTCCTCGACGAGGGCCGGGTCGTGGGCACCGGACGCCACCACGAGCTGATGGCGGGCAAC
GAGACGTACCGGGAGATCGTGCTCTCCCAGCTGACCGAGGCGGAGGCAGCCTGA

Domains

Predicted by InterProScan.

ABC transporter transmembrane region (ABC_membrane)

(18-288)

ABC transporter (ABC_tran)

(351-498)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

40.463

97.227

0.393