Detailed information NTG0035473

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: D11S_RS01845
• Genome accession: NC_013416
• Coordinates: 357971..359089 (+)
• Length: 372 a.a.
• NCBI ID: WP_005544878.1
• Uniprot ID: -
• Organism: Aggregatibacter actinomycetemcomitans D11S-1
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 352971..364089

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
D11S_RS01820 (D11S_0387)	lexA	355578..356201 (+)	624	WP_012820850.1	transcriptional repressor LexA	-
D11S_RS01825 (D11S_0389)	rpsF	356353..356730 (+)	378	WP_005541284.1	30S ribosomal protein S6	-
D11S_RS01830 (D11S_0390)	priB	356717..357043 (+)	327	WP_005544874.1	primosomal replication protein N	-
D11S_RS01835 (D11S_0391)	rpsR	357056..357286 (+)	231	WP_005541294.1	30S ribosomal protein S18	-
D11S_RS01840 (D11S_0392)	rplI	357302..357751 (+)	450	WP_005544876.1	50S ribosomal protein L9	-
D11S_RS01845 (D11S_0393)	dprA	357971..359089 (+)	1119	WP_005544878.1	DNA-processing protein DprA	Machinery gene
D11S_RS01850 (D11S_0394)	glpQ	359146..360228 (-)	1083	WP_005544880.1	glycerophosphodiester phosphodiesterase	-
D11S_RS01855 (D11S_0395)	glpT	360462..361904 (-)	1443	WP_012820852.1	glycerol-3-phosphate transporter	-
D11S_RS01860 (D11S_0397)	rlmB	362237..362974 (-)	738	WP_005544885.1	23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	-

Sequence

Protein

• Length: 372 a.a.
• Molecular weight: 41753.00 Da
• Isoelectric Point: 6.4276

>NTDB_id=35473 D11S_RS01845 WP_005544878.1 357971..359089(+) (dprA) [Aggregatibacter actinomycetemcomitans D11S-1]
MNKHLALLLRLLQIPKLGPTTIHKILAQINLFELQYYDAAAFTQMGWNAQQIQAWFHPEQRYIEPALLWGEKEGNHILDY
FHPDYPELLKQIESAPPVLFVKGTTSVLSQQQIAIVGSRQCSSYGEYWAKYFATELTTNGFIITSGLALGIDGFCHQAAV
DLKQPTIAVLGSGLEEVYPAKHRKLAQNIIEHGGALVSEFFPLQPPIAENFPRRNRIISGLSLATLIIEATERSGSLITA
RYALEQNREIFALPGNIQSQFSQGCHKLIKQGAMLVENVEDILENLEPQMTWKKRPQNRPHFPAITKTTSASLPPPVTPS
HPELYNLIGYNPISADNLSTTLNLSIDQILIQLLELELQDLIISENGLYRRV

Nucleotide

• Length: 1119 bp

>NTDB_id=35473 D11S_RS01845 WP_005544878.1 357971..359089(+) (dprA) [Aggregatibacter actinomycetemcomitans D11S-1]
ATGAACAAACATTTAGCACTTTTACTGCGCCTATTACAAATTCCCAAACTGGGTCCTACCACAATTCATAAAATCCTTGC
GCAAATCAATTTATTCGAATTGCAATATTACGACGCGGCTGCATTTACGCAAATGGGCTGGAACGCACAGCAAATTCAAG
CATGGTTTCATCCGGAACAGCGCTACATTGAACCGGCACTCTTGTGGGGAGAAAAAGAAGGGAATCATATTCTTGATTAT
TTTCACCCTGATTATCCCGAATTATTAAAACAAATCGAAAGCGCACCGCCGGTATTATTCGTCAAAGGTACGACAAGTGT
GCTATCACAGCAACAAATCGCTATTGTCGGCAGCCGTCAATGTTCAAGTTACGGTGAATATTGGGCGAAATATTTTGCCA
CGGAATTAACCACCAACGGCTTCATCATTACCAGCGGGTTGGCGTTAGGCATTGATGGTTTCTGTCATCAGGCTGCGGTC
GATTTAAAACAACCGACCATCGCCGTTTTAGGCAGCGGATTGGAAGAAGTGTATCCCGCCAAACATCGCAAATTAGCGCA
GAATATTATTGAACATGGCGGTGCGTTGGTTTCTGAATTTTTTCCGTTACAACCACCGATTGCCGAAAATTTTCCTCGCC
GCAATCGCATTATCAGTGGGTTATCATTAGCAACCTTAATTATTGAAGCCACCGAACGTAGCGGATCATTAATTACAGCA
CGCTATGCATTAGAACAAAACAGAGAAATTTTTGCACTACCGGGCAATATTCAAAGTCAGTTCAGCCAAGGTTGCCATAA
GCTTATTAAACAGGGCGCAATGCTGGTCGAAAACGTGGAAGATATTTTAGAAAATCTTGAGCCACAAATGACATGGAAAA
AACGCCCGCAAAATCGACCGCACTTTCCCGCTATAACGAAAACGACGTCCGCCTCATTACCACCCCCGGTCACACCGTCT
CATCCTGAGTTATATAATTTGATCGGTTATAATCCGATAAGCGCGGATAACTTATCAACCACCCTTAATTTGTCTATTGA
TCAAATTCTCATTCAACTGTTGGAGCTGGAATTACAGGATTTGATTATCAGTGAGAACGGGTTATATCGGCGGGTTTGA

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (71-277)

• DprA winged helix domain (DprA_WH) (311-365)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Haemophilus influenzae Rd KW20	63.032	100	0.637
dprA	Glaesserella parasuis strain SC1401	54.261	94.624	0.513
dprA	Vibrio campbellii strain DS40M4	43.75	98.925	0.433
dprA	Vibrio cholerae strain A1552	42.781	100	0.43
dprA	Legionella pneumophila strain ERS1305867	40.27	99.462	0.401