Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   EYC57_RS15375 Genome accession   NZ_CP036256
Coordinates   3262583..3262984 (-) Length   133 a.a.
NCBI ID   WP_005913706.1    Uniprot ID   A0AAI7ZH35
Organism   Xanthomonas oryzae strain BAI23     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3257583..3267984
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EYC57_RS15360 (EYC57_15360) - 3259597..3261633 (-) 2037 WP_131075517.1 methyl-accepting chemotaxis protein -
  EYC57_RS15365 (EYC57_15365) - 3261673..3262203 (-) 531 WP_003482487.1 chemotaxis protein CheW -
  EYC57_RS15370 (EYC57_15370) - 3262203..3262565 (-) 363 WP_014504132.1 response regulator -
  EYC57_RS15375 (EYC57_15375) pilG 3262583..3262984 (-) 402 WP_005913706.1 twitching motility response regulator PilG Regulator
  EYC57_RS15380 (EYC57_15380) gshB 3263221..3264171 (+) 951 WP_053502996.1 glutathione synthase -
  EYC57_RS15385 (EYC57_15385) - 3264168..3265043 (+) 876 WP_053502997.1 energy transducer TonB -
  EYC57_RS15390 (EYC57_15390) - 3265334..3266249 (-) 916 Protein_2792 ADP-ribosylglycohydrolase family protein -
  EYC57_RS15395 (EYC57_15395) tsaB 3266246..3266965 (-) 720 WP_131075518.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14667.03 Da        Isoelectric Point: 6.9539

>NTDB_id=347731 EYC57_RS15375 WP_005913706.1 3262583..3262984(-) (pilG) [Xanthomonas oryzae strain BAI23]
MSENIAAGGELAGLKVMVIDDSKTIRRTAETLLKREGCEVVTATDGFEALAKIADQQPQIIFVDIMMPRLDGYQTCALIK
GNQLFKSTPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTREELLSAIRTYVHA

Nucleotide


Download         Length: 402 bp        

>NTDB_id=347731 EYC57_RS15375 WP_005913706.1 3262583..3262984(-) (pilG) [Xanthomonas oryzae strain BAI23]
ATGAGTGAAAACATTGCTGCGGGTGGGGAACTCGCAGGACTGAAGGTGATGGTGATCGATGATTCGAAAACCATTCGCCG
CACCGCCGAAACGCTGCTGAAGCGGGAAGGTTGTGAAGTAGTGACAGCAACGGATGGTTTCGAGGCACTGGCCAAAATTG
CGGACCAGCAACCTCAGATCATTTTTGTTGACATCATGATGCCGCGCCTGGATGGGTACCAGACGTGCGCGTTGATCAAG
GGCAACCAGCTCTTCAAATCGACGCCGGTAATCATGTTGTCGTCCAAGGATGGGCTGTTCGACAAGGCCCGCGGCCGCAT
CGTCGGTTCCGAGCAATATCTGACCAAGCCGTTCACCCGTGAAGAACTATTGAGCGCAATCCGCACGTACGTCCACGCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

75.207

90.977

0.684

Multiple sequence alignment