Detailed information
Bioinformatically predicted
Overview
| Name | comGB | Type | Machinery gene |
| Locus tag | ES965_RS12420 | Genome accession | NZ_CP035391 |
| Coordinates | 2399238..2400275 (-) | Length | 345 a.a. |
| NCBI ID | WP_129092528.1 | Uniprot ID | - |
| Organism | Bacillus subtilis strain SRCM103689 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2394238..2405275
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ES965_RS12370 (ES965_12370) | tasA | 2394335..2395120 (-) | 786 | WP_129092524.1 | biofilm matrix protein TasA | - |
| ES965_RS12375 (ES965_12375) | sipW | 2395184..2395756 (-) | 573 | WP_003246088.1 | signal peptidase I SipW | - |
| ES965_RS12380 (ES965_12380) | tapA | 2395740..2396501 (-) | 762 | WP_129092525.1 | amyloid fiber anchoring/assembly protein TapA | - |
| ES965_RS12385 (ES965_12385) | yqzG | 2396774..2397100 (+) | 327 | WP_024573388.1 | YqzG/YhdC family protein | - |
| ES965_RS12390 (ES965_12390) | spoIITA | 2397142..2397321 (-) | 180 | WP_014480252.1 | YqzE family protein | - |
| ES965_RS12395 (ES965_12395) | comGG | 2397392..2397766 (-) | 375 | WP_032726157.1 | ComG operon protein ComGG | Machinery gene |
| ES965_RS12400 (ES965_12400) | comGF | 2397767..2398150 (-) | 384 | WP_129092526.1 | ComG operon protein ComGF | Machinery gene |
| ES965_RS12405 (ES965_12405) | comGE | 2398176..2398523 (-) | 348 | WP_123373078.1 | ComG operon protein 5 | Machinery gene |
| ES965_RS12410 (ES965_12410) | comGD | 2398507..2398938 (-) | 432 | WP_024573390.1 | comG operon protein ComGD | Machinery gene |
| ES965_RS12415 (ES965_12415) | comGC | 2398928..2399224 (-) | 297 | WP_129092527.1 | comG operon protein ComGC | Machinery gene |
| ES965_RS12420 (ES965_12420) | comGB | 2399238..2400275 (-) | 1038 | WP_129092528.1 | comG operon protein ComGB | Machinery gene |
| ES965_RS12425 (ES965_12425) | comGA | 2400262..2401332 (-) | 1071 | WP_024573393.1 | competence protein ComGA | Machinery gene |
| ES965_RS12430 (ES965_12430) | - | 2401545..2401742 (-) | 198 | WP_124058597.1 | hypothetical protein | - |
| ES965_RS12435 (ES965_12435) | corA | 2401744..2402697 (-) | 954 | WP_032677123.1 | magnesium transporter CorA | - |
| ES965_RS12440 (ES965_12440) | yqhB | 2402840..2404168 (+) | 1329 | WP_003230150.1 | hemolysin family protein | - |
| ES965_RS12445 (ES965_12445) | rsbRD | 2404221..2405057 (-) | 837 | WP_015384093.1 | RsbT co-antagonist protein RsbRD | - |
Sequence
Protein
Download Length: 345 a.a. Molecular weight: 39736.13 Da Isoelectric Point: 9.6026
>NTDB_id=339629 ES965_RS12420 WP_129092528.1 2399238..2400275(-) (comGB) [Bacillus subtilis strain SRCM103689]
MKKIRKVWSLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTDTVTCLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKRVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDMLFAFF
QHIDLVIILLALFTAGIGIYYWLVFKKKSPARQMLICVRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKYQT
FLPFYRCEAEQLIERLKAGESIEAAICGSPFYETDFSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLVPMYQMMNQM
MKKIRKVWSLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTDTVTCLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKRVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDMLFAFF
QHIDLVIILLALFTAGIGIYYWLVFKKKSPARQMLICVRIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKYQT
FLPFYRCEAEQLIERLKAGESIEAAICGSPFYETDFSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLVPMYQMMNQM
Nucleotide
Download Length: 1038 bp
>NTDB_id=339629 ES965_RS12420 WP_129092528.1 2399238..2400275(-) (comGB) [Bacillus subtilis strain SRCM103689]
ATGAAAAAGATTAGAAAAGTCTGGTCATTAAAGGATCAAGCCAGGTTATTAAAGCGGCTCGGTGAAATGACTGCGGGGGG
ATATACGCTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCGGCTGACTTGACTGATACGGTCA
CTTGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCCATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGAGTGCTGCGCTATCCGCTTTTCCTCATATTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATGCTTTTTGCTTTTTTC
CAGCATATTGATCTTGTGATCATTTTGCTGGCTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTGATTTGTGTCAGGATTCCTTTGGTTGGAAAGCTTGTCAAGCTGTTTAACAGTTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAATATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTGAGTCAATTGAAGCCGCTATTTG
TGGAAGCCCTTTTTATGAAACTGATTTTTCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGGGAGCTTT
TCACATACAGCCAGTTCATATTGCAGCGGCTGGAACACAAGGCGCAAAAATGGACAGGCATTCTTCAGCCAATGATTTAT
GGATTTGTTGCAGCGATGATCTTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
ATGAAAAAGATTAGAAAAGTCTGGTCATTAAAGGATCAAGCCAGGTTATTAAAGCGGCTCGGTGAAATGACTGCGGGGGG
ATATACGCTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCGGCTGACTTGACTGATACGGTCA
CTTGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCCATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGAGTGCTGCGCTATCCGCTTTTCCTCATATTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATGCTTTTTGCTTTTTTC
CAGCATATTGATCTTGTGATCATTTTGCTGGCTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTGATTTGTGTCAGGATTCCTTTGGTTGGAAAGCTTGTCAAGCTGTTTAACAGTTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAATATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTGAGTCAATTGAAGCCGCTATTTG
TGGAAGCCCTTTTTATGAAACTGATTTTTCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGGGAGCTTT
TCACATACAGCCAGTTCATATTGCAGCGGCTGGAACACAAGGCGCAAAAATGGACAGGCATTCTTCAGCCAATGATTTAT
GGATTTGTTGCAGCGATGATCTTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGB | Bacillus subtilis subsp. subtilis str. 168 |
97.833 |
93.623 |
0.916 |