Detailed information NTG0320178

Bioinformatically predicted

Overview

• Name: comEC/comE3
• Type: Machinery gene
• Locus tag: D4K04_RS07675
• Genome accession: NZ_CP032904
• Coordinates: 1553910..1555223 (-)
• Length: 437 a.a.
• NCBI ID: WP_201737390.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain 169-A-EK5
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1548910..1560223

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
D4K04_RS07645	nadC	1549373..1550194 (-)	822	WP_139522283.1	carboxylating nicotinate-nucleotide diphosphorylase	-
D4K04_RS07650	nadA	1550194..1551204 (-)	1011	WP_139522284.1	quinolinate synthase NadA	-
D4K04_RS07655	-	1551194..1551997 (-)	804	WP_139522285.1	phosphatidylserine decarboxylase	-
D4K04_RS07660	-	1551991..1552497 (-)	507	WP_000958158.1	hypothetical protein	-
D4K04_RS07665	-	1552510..1553004 (-)	495	WP_201737389.1	hypothetical protein	-
D4K04_RS07670	mqnP	1552997..1553839 (-)	843	WP_236636128.1	menaquinone biosynthesis prenyltransferase MqnP	-
D4K04_RS07675	comEC/comE3	1553910..1555223 (-)	1314	WP_201737390.1	ComEC/Rec2 family competence protein	Machinery gene
D4K04_RS07680	-	1555220..1556686 (-)	1467	WP_139522288.1	replicative DNA helicase	-
D4K04_RS07685	-	1556697..1558097 (-)	1401	WP_139522289.1	NAD(P)H-hydrate dehydratase	-
D4K04_RS07690	crdS	1558100..1559302 (-)	1203	WP_139522290.1	copper-sensing histidine kinase CrdS	-
D4K04_RS07695	crdR	1559268..1559909 (-)	642	WP_120853288.1	copper response regulator transcription factor CrdR	-

Sequence

Protein

• Length: 437 a.a.
• Molecular weight: 50333.34 Da
• Isoelectric Point: 9.9534

>NTDB_id=320178 D4K04_RS07675 WP_201737390.1 1553910..1555223(-) (comEC/comE3) [Helicobacter pylori strain 169-A-EK5]
MKDKTFQGAFELLSTPKEYLWCGVVLSLLLVINLYLEYLNYQKLDFSKPTSLNAQILLQYPKTKDQKTYFVLKLQSKNMI
FYTTIKEPLKNLQYRHAQFFGKFKFCSFLESLKSCFFQTYSFSLTRKHNFKSHVRHFIDSAHENALVGNLYRALFIGDSL
NKDLRDKANALGINHLLAISGFHLGILSASVYFLFSLFYTPLQKRYFPYRNAFYDIGVLVWVFLLGYLLLLDFLPSFFRA
FLMGLLGFLACFFGVRLLSFKLLILACCIAIALLPKLLFSVGFLLSVCGVWYIFLFLKHTQIFFKTSSFLRRSFQAIALS
ALVFLNMLIIVHAFFPMFSPYQLFSIPLGLIFIVFFPLSLFLHAVGLGSLLDRLLSMPLTIPTISVPSPLWLLGVHLFLT
ILSARSFKVYLSMNVLSAGFFLYCCYQYIIMPSLIVG

Nucleotide

• Length: 1314 bp

>NTDB_id=320178 D4K04_RS07675 WP_201737390.1 1553910..1555223(-) (comEC/comE3) [Helicobacter pylori strain 169-A-EK5]
TTGAAAGACAAAACTTTTCAGGGGGCGTTTGAACTTCTTTCAACCCCCAAAGAATACTTATGGTGTGGGGTTGTTTTAAG
CCTTTTGTTGGTGATCAACCTTTATTTAGAATACTTGAATTACCAAAAGCTTGATTTTTCAAAACCGACAAGCCTGAACG
CTCAAATCTTGTTGCAATACCCCAAAACTAAAGATCAAAAAACCTATTTTGTTTTAAAGCTCCAATCAAAAAACATGATC
TTTTACACCACCATTAAAGAGCCTTTAAAAAACCTCCAATACCGCCACGCGCAATTTTTTGGCAAGTTCAAATTTTGTTC
GTTCTTAGAGTCTCTAAAATCATGCTTTTTTCAAACTTACTCTTTTTCTTTAACACGAAAACACAATTTCAAATCGCATG
TGCGCCATTTCATTGATAGCGCTCATGAAAACGCTTTAGTGGGCAATTTGTATCGAGCGTTATTCATAGGGGATAGCTTG
AATAAGGACTTAAGAGACAAGGCTAACGCGCTAGGGATCAACCACTTACTAGCCATTAGCGGGTTTCATTTGGGGATTTT
GAGCGCGAGCGTGTATTTTCTTTTCTCTCTTTTTTATACCCCCTTACAAAAACGCTATTTCCCTTATAGGAACGCTTTTT
ATGATATAGGGGTTTTGGTGTGGGTTTTTTTGCTAGGGTATTTATTGCTATTGGATTTTTTACCCTCTTTTTTCAGGGCG
TTTTTAATGGGCTTATTAGGGTTTTTGGCATGCTTTTTTGGGGTAAGGCTTTTGAGTTTTAAACTTTTGATTTTAGCGTG
CTGTATCGCCATAGCGTTACTCCCTAAATTGCTTTTTAGCGTGGGGTTTTTGCTTTCTGTTTGTGGGGTGTGGTATATCT
TTTTATTTTTAAAACACACTCAAATTTTTTTTAAAACCTCTTCTTTTTTAAGGCGATCGTTTCAAGCGATCGCTTTAAGC
GCGCTAGTGTTTTTGAACATGCTCATTATTGTGCATGCCTTTTTCCCTATGTTTTCGCCCTACCAGCTCTTTAGCATTCC
TTTAGGCTTGATTTTTATCGTGTTTTTCCCTTTGAGTTTGTTCTTGCATGCGGTGGGTTTGGGGTCTTTGTTGGATCGCC
TTTTAAGCATGCCTTTAACAATCCCCACGATTTCGGTTCCTTCACCTTTATGGCTTTTGGGGGTGCATTTATTTTTAACG
ATTTTAAGCGCGCGTTCTTTTAAGGTTTATTTAAGCATGAATGTTTTGAGCGCGGGCTTTTTCTTGTATTGTTGCTATCA
ATATATTATAATGCCTAGTTTAATTGTAGGTTAG

Domains

Predicted by InterproScan.

• Competence protein (Competence) (159-378)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEC/comE3	Helicobacter pylori 26695	96.339	100	0.963