Detailed information
Bioinformatically predicted
Overview
| Name | nucA/comI | Type | Machinery gene |
| Locus tag | D9C08_RS17295 | Genome accession | NZ_CP032872 |
| Coordinates | 3217008..3217418 (-) | Length | 136 a.a. |
| NCBI ID | WP_009967785.1 | Uniprot ID | A0A6I4D881 |
| Organism | Bacillus subtilis subsp. subtilis strain 2KL1 | ||
| Function | cleavage of dsDNA into ssDNA (predicted from homology) DNA processing |
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Genomic Context
Location: 3212008..3222418
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D9C08_RS17265 (D9C08_17265) | - | 3212096..3212236 (+) | 141 | WP_003226124.1 | sporulation histidine kinase inhibitor Sda | - |
| D9C08_RS17270 (D9C08_17270) | yqeF | 3212542..3213273 (-) | 732 | WP_003229964.1 | SGNH/GDSL hydrolase family protein | - |
| D9C08_RS17275 (D9C08_17275) | cwlH | 3213525..3214277 (-) | 753 | WP_069837642.1 | N-acetylmuramoyl-L-alanine amidase CwlH | - |
| D9C08_RS17280 (D9C08_17280) | yqeD | 3214464..3215090 (+) | 627 | WP_014480319.1 | TVP38/TMEM64 family protein | - |
| D9C08_RS17285 (D9C08_17285) | gnd | 3215109..3216002 (-) | 894 | WP_069837643.1 | phosphogluconate dehydrogenase (NAD(+)-dependent, decarboxylating) | - |
| D9C08_RS17290 (D9C08_17290) | yqeB | 3216253..3216975 (+) | 723 | WP_014480321.1 | hypothetical protein | - |
| D9C08_RS17295 (D9C08_17295) | nucA/comI | 3217008..3217418 (-) | 411 | WP_009967785.1 | sporulation-specific Dnase NucB | Machinery gene |
| D9C08_RS17300 (D9C08_17300) | sigK | 3217614..3218342 (+) | 729 | WP_013308023.1 | RNA polymerase sporulation sigma factor SigK | - |
| D9C08_RS17305 (D9C08_17305) | - | 3218342..3218440 (+) | 99 | WP_031600702.1 | hypothetical protein | - |
| D9C08_RS23940 | - | 3218437..3218649 (-) | 213 | Protein_3336 | recombinase family protein | - |
| D9C08_RS17315 (D9C08_17315) | fumC | 3218868..3220256 (-) | 1389 | WP_014480325.1 | class II fumarate hydratase | - |
| D9C08_RS17320 (D9C08_17320) | - | 3220423..3221313 (+) | 891 | WP_014480326.1 | LysR family transcriptional regulator | - |
Sequence
Protein
Download Length: 136 a.a. Molecular weight: 14967.97 Da Isoelectric Point: 5.1853
>NTDB_id=319947 D9C08_RS17295 WP_009967785.1 3217008..3217418(-) (nucA/comI) [Bacillus subtilis subsp. subtilis strain 2KL1]
MKKWMAGLFLAAAVLLCLMVPQQIQGASSYDKVLYFPLSRYPETGSHIRDAIAEGHPDICTIDRDGADKRREESLKGIPT
KPGYDRDEWPMAVCEEGGAGADVRYVTPSDNRGAGSWVGNQMSSYPDGTRVLFIVQ
MKKWMAGLFLAAAVLLCLMVPQQIQGASSYDKVLYFPLSRYPETGSHIRDAIAEGHPDICTIDRDGADKRREESLKGIPT
KPGYDRDEWPMAVCEEGGAGADVRYVTPSDNRGAGSWVGNQMSSYPDGTRVLFIVQ
Nucleotide
Download Length: 411 bp
>NTDB_id=319947 D9C08_RS17295 WP_009967785.1 3217008..3217418(-) (nucA/comI) [Bacillus subtilis subsp. subtilis strain 2KL1]
ATGAAAAAATGGATGGCAGGCCTGTTTCTTGCTGCAGCAGTTCTTCTTTGTTTAATGGTTCCGCAACAGATCCAAGGCGC
ATCTTCGTATGACAAAGTGTTATATTTTCCGCTGTCTCGTTATCCGGAAACCGGCAGTCATATTAGAGATGCGATTGCAG
AGGGACATCCAGATATTTGTACCATTGACAGAGATGGAGCAGACAAAAGGCGGGAGGAATCTTTAAAGGGAATCCCGACC
AAGCCGGGCTATGACCGGGATGAGTGGCCGATGGCGGTCTGCGAGGAAGGCGGCGCAGGGGCTGATGTCCGATATGTGAC
GCCTTCTGATAATCGCGGCGCCGGCTCGTGGGTAGGGAATCAAATGAGCAGCTATCCTGACGGCACCAGAGTGCTGTTTA
TTGTGCAGTAG
ATGAAAAAATGGATGGCAGGCCTGTTTCTTGCTGCAGCAGTTCTTCTTTGTTTAATGGTTCCGCAACAGATCCAAGGCGC
ATCTTCGTATGACAAAGTGTTATATTTTCCGCTGTCTCGTTATCCGGAAACCGGCAGTCATATTAGAGATGCGATTGCAG
AGGGACATCCAGATATTTGTACCATTGACAGAGATGGAGCAGACAAAAGGCGGGAGGAATCTTTAAAGGGAATCCCGACC
AAGCCGGGCTATGACCGGGATGAGTGGCCGATGGCGGTCTGCGAGGAAGGCGGCGCAGGGGCTGATGTCCGATATGTGAC
GCCTTCTGATAATCGCGGCGCCGGCTCGTGGGTAGGGAATCAAATGAGCAGCTATCCTGACGGCACCAGAGTGCTGTTTA
TTGTGCAGTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| nucA/comI | Bacillus subtilis subsp. subtilis str. 168 |
62.609 |
84.559 |
0.529 |