Detailed information    

insolico Bioinformatically predicted

Overview


Name   comE/blpR   Type   Regulator
Locus tag   SEZ_RS04755 Genome accession   NC_011134
Coordinates   1004615..1005352 (+) Length   245 a.a.
NCBI ID   WP_012515591.1    Uniprot ID   B4U2V5
Organism   Streptococcus equi subsp. zooepidemicus MGCS10565     
Function   activate transcription of early competence genes; regulation of comX expression (predicted from homology)   
Competence regulation

Genomic Context


Location: 999615..1010352
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SEZ_RS04725 (Sez_0958) - 1000065..1000970 (-) 906 WP_012515585.1 diacylglycerol kinase family protein -
  SEZ_RS04730 (Sez_0959) - 1001080..1001730 (-) 651 WP_012515586.1 hemolysin III family protein -
  SEZ_RS04735 (Sez_0960) - 1001714..1002169 (-) 456 WP_012515587.1 DUF1836 domain-containing protein -
  SEZ_RS04740 (Sez_0961) - 1002429..1003184 (+) 756 WP_012515588.1 class I SAM-dependent methyltransferase -
  SEZ_RS04745 (Sez_0962) - 1003212..1003550 (+) 339 WP_012515589.1 cupin domain-containing protein -
  SEZ_RS04750 (Sez_0963) - 1003552..1003857 (+) 306 WP_012515590.1 hypothetical protein -
  SEZ_RS04755 (Sez_0964) comE/blpR 1004615..1005352 (+) 738 WP_012515591.1 response regulator transcription factor Regulator
  SEZ_RS04760 (Sez_0965) - 1005725..1005925 (+) 201 WP_012515592.1 hypothetical protein -
  SEZ_RS04765 (Sez_0966) - 1005992..1006846 (+) 855 WP_012515593.1 ABC transporter ATP-binding protein -
  SEZ_RS09955 (Sez_0967) - 1006852..1007331 (+) 480 WP_012515594.1 hypothetical protein -
  SEZ_RS09960 (Sez_0968) - 1007319..1008014 (+) 696 WP_228361775.1 ABC transporter permease subunit -
  SEZ_RS04775 (Sez_0969) - 1008276..1008506 (+) 231 WP_012515596.1 Blp family class II bacteriocin -
  SEZ_RS04780 (Sez_0970) - 1009299..1010150 (+) 852 WP_012515597.1 thioredoxin family protein -

Sequence


Protein


Download         Length: 245 a.a.        Molecular weight: 28894.28 Da        Isoelectric Point: 7.8796

>NTDB_id=31373 SEZ_RS04755 WP_012515591.1 1004615..1005352(+) (comE/blpR) [Streptococcus equi subsp. zooepidemicus MGCS10565]
MNIFILEDDLGQQFRLEMKIQEILDKHHWTCDRFEVYGKPYQLLANVTERGRHQLFFLDSQIRNDEKKGLAVAREIRKRD
PYALIVFVTTHSELMPVSFRYQVSALDFIDKELSMKHFSDRIERAIIYAYEEQENVTSEGLFIFVTAKAQVQVPFSSLLF
IETSSTPHKLILHSQNERIEFYGFLSEVLKQDSRLVQCHRSYVINPYNVSFLDRDKRLLYFKNGQSCMVSRLKMKALEAS
IKALH

Nucleotide


Download         Length: 738 bp        

>NTDB_id=31373 SEZ_RS04755 WP_012515591.1 1004615..1005352(+) (comE/blpR) [Streptococcus equi subsp. zooepidemicus MGCS10565]
ATGAATATTTTTATTCTCGAAGATGATCTAGGCCAACAGTTTAGGCTTGAGATGAAGATTCAAGAGATATTGGATAAGCA
TCACTGGACTTGTGATCGTTTTGAAGTTTATGGAAAGCCCTACCAGCTTCTGGCAAATGTTACAGAGAGAGGCAGGCATC
AGCTTTTCTTTCTCGATAGTCAAATTCGAAATGATGAGAAAAAGGGCTTAGCTGTTGCTCGTGAGATCAGAAAGCGTGAC
CCTTATGCCCTCATTGTTTTTGTCACCACACATTCTGAGCTTATGCCAGTTTCTTTTCGTTATCAGGTGTCTGCTCTAGA
TTTTATCGATAAGGAATTGTCAATGAAACATTTCTCAGATAGGATTGAAAGAGCCATTATATATGCTTATGAAGAGCAAG
AAAATGTAACCTCAGAGGGCTTATTTATTTTTGTAACGGCTAAGGCTCAGGTGCAGGTTCCTTTTTCAAGCCTATTGTTC
ATTGAGACCTCTAGTACTCCTCACAAGTTGATTTTGCATTCTCAAAACGAGCGAATAGAATTTTATGGCTTTCTTTCAGA
GGTTCTTAAGCAAGATTCCAGACTAGTCCAATGTCATCGTTCTTATGTTATCAATCCTTACAATGTTTCGTTTCTTGATC
GTGATAAGCGTTTACTCTATTTCAAGAATGGGCAGTCTTGCATGGTTTCAAGACTAAAAATGAAAGCACTTGAGGCGTCT
ATTAAGGCTTTGCATTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB B4U2V5

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comE/blpR Streptococcus mutans UA159

53.719

98.776

0.531

  comE/comE1 Streptococcus equinus JB1

45.455

98.776

0.449

  comE/comE2 Streptococcus equinus JB1

36.885

99.592

0.367


Multiple sequence alignment