Detailed information NTG0313087

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: AhaeAN4_RS09500
• Genome accession: NZ_CP031979
• Coordinates: 1928313..1929032 (-)
• Length: 239 a.a.
• NCBI ID: WP_005080462.1
• Uniprot ID: C0VKX1
• Organism: Acinetobacter haemolyticus strain AN4
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1923313..1934032

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AhaeAN4_RS09470 (AhaeAN4_09535)	-	1923746..1924186 (-)	441	WP_004639295.1	SRPBCC family protein	-
AhaeAN4_RS09475 (AhaeAN4_09540)	tadA	1924254..1924766 (-)	513	WP_005080470.1	tRNA adenosine(34) deaminase TadA	-
AhaeAN4_RS09480 (AhaeAN4_09545)	-	1924771..1925895 (-)	1125	WP_171055793.1	enoyl-CoA hydratase/isomerase family protein	-
AhaeAN4_RS09485 (AhaeAN4_09550)	ung	1925892..1926605 (-)	714	WP_005090364.1	uracil-DNA glycosylase	-
AhaeAN4_RS09490 (AhaeAN4_09555)	-	1926652..1927248 (-)	597	WP_017394547.1	6-pyruvoyl trahydropterin synthase family protein	-
AhaeAN4_RS09495 (AhaeAN4_09560)	gspK	1927334..1928311 (-)	978	WP_004639300.1	type II secretion system minor pseudopilin GspK	-
AhaeAN4_RS09500 (AhaeAN4_09565)	xcpW	1928313..1929032 (-)	720	WP_005080462.1	type II secretion system minor pseudopilin GspJ	Machinery gene
AhaeAN4_RS09505 (AhaeAN4_09570)	xcpV	1929038..1929382 (-)	345	WP_042110486.1	type II secretion system protein	Machinery gene
AhaeAN4_RS09510 (AhaeAN4_09575)	-	1929585..1930196 (-)	612	WP_005080458.1	type II secretion system protein	-
AhaeAN4_RS09515 (AhaeAN4_09580)	-	1930211..1930816 (-)	606	WP_017394545.1	TetR/AcrR family transcriptional regulator	-
AhaeAN4_RS09520 (AhaeAN4_09585)	-	1930858..1931631 (-)	774	WP_005080456.1	TatD family hydrolase	-
AhaeAN4_RS09525 (AhaeAN4_09590)	-	1931652..1931996 (-)	345	WP_004639306.1	PilZ domain-containing protein	-
AhaeAN4_RS09530 (AhaeAN4_09595)	-	1932319..1932627 (-)	309	WP_004639308.1	hypothetical protein	-
AhaeAN4_RS09535 (AhaeAN4_09600)	-	1932771..1933754 (-)	984	WP_004639309.1	DNA polymerase III subunit delta'	-

Sequence

Protein

• Length: 239 a.a.
• Molecular weight: 27659.68 Da
• Isoelectric Point: 9.4555

>NTDB_id=313087 AhaeAN4_RS09500 WP_005080462.1 1928313..1929032(-) (xcpW) [Acinetobacter haemolyticus strain AN4]
MNNKNNNMQISKFHFVNPRTQSLAFRLAERSSSARLNRSSGFTLVELLVAIAIFAVLSMLGWKVFDYLLKVKDRNAEHEV
SLFALQDAYQQILRDSLQIIPLTANDGRQLQAALVLNDQVFMFSKAGVSDPLKQGLSPYERIEYRFDESQKRLYRLKYTN
LNIPNRVQPMSSVLLDNVERFKVSVFNPQELMQWPENNVDPENTAELRKLPLGLKIQLTVAGTDYEWIYRLIDRSQDSQ

Nucleotide

• Length: 720 bp

>NTDB_id=313087 AhaeAN4_RS09500 WP_005080462.1 1928313..1929032(-) (xcpW) [Acinetobacter haemolyticus strain AN4]
ATGAATAATAAAAACAATAATATGCAAATCTCAAAGTTTCACTTTGTTAATCCTCGCACTCAAAGCCTAGCTTTTCGTCT
TGCGGAGCGGTCGAGCAGTGCTCGACTTAATCGCTCCTCAGGATTTACGTTGGTTGAGTTGCTGGTTGCAATTGCAATTT
TTGCAGTTCTTTCTATGTTAGGTTGGAAAGTATTTGATTATTTGTTAAAAGTGAAAGATCGAAATGCTGAACATGAAGTG
AGTTTGTTTGCATTACAAGACGCTTATCAGCAGATCTTGCGAGATAGTTTGCAGATCATCCCTTTAACAGCAAATGATGG
AAGGCAATTGCAAGCTGCATTGGTACTTAATGATCAGGTTTTTATGTTCAGTAAAGCTGGTGTTTCTGATCCGCTCAAGC
AAGGGCTGTCGCCATACGAGCGCATCGAATATCGTTTTGATGAGTCTCAAAAAAGACTATATCGATTGAAATACACAAAT
CTAAATATTCCAAATCGTGTGCAGCCGATGTCAAGTGTATTGTTGGATAATGTTGAGCGCTTTAAAGTATCTGTTTTCAA
TCCACAAGAGTTAATGCAGTGGCCTGAAAATAATGTAGATCCAGAAAACACGGCTGAATTAAGAAAGTTACCATTAGGAT
TGAAAATTCAATTGACTGTTGCTGGTACAGATTATGAGTGGATCTATCGTCTGATCGATCGTAGTCAGGATAGTCAATGA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (37-60)

• Type II secretion system (T2SS), protein J (T2SSJ) (94-223)

3D structure

• AlphaFold DB: C0VKX1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	71.564	88.285	0.632