Detailed information
Bioinformatically predicted
Overview
| Name | comE | Type | Machinery gene |
| Locus tag | NGK_RS09405 | Genome accession | NC_011035 |
| Coordinates | 1723935..1724330 (-) | Length | 131 a.a. |
| NCBI ID | WP_003703428.1 | Uniprot ID | - |
| Organism | Neisseria gonorrhoeae NCCP11945 | ||
| Function | DNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1718935..1729330
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NGK_RS09360 (NGK_2084) | - | 1719240..1719485 (-) | 246 | WP_003689849.1 | hypothetical protein | - |
| NGK_RS09370 (NGK_2085) | - | 1719597..1720025 (+) | 429 | WP_010359204.1 | CopD family protein | - |
| NGK_RS09375 (NGK_2086) | - | 1720037..1720513 (+) | 477 | WP_003689851.1 | CYTH domain-containing protein | - |
| NGK_RS09380 (NGK_2087) | - | 1720543..1721031 (-) | 489 | WP_041421364.1 | dihydrofolate reductase | - |
| NGK_RS09385 (NGK_2088) | aroG | 1721099..1722154 (-) | 1056 | WP_003689853.1 | 3-deoxy-7-phosphoheptulonate synthase AroG | - |
| NGK_RS15540 | - | 1722316..1722543 (-) | 228 | WP_153707886.1 | hypothetical protein | - |
| NGK_RS16080 (NGK_2091) | - | 1722578..1722727 (+) | 150 | WP_172764044.1 | hypothetical protein | - |
| NGK_RS16305 (NGK_2092) | - | 1722769..1723065 (+) | 297 | WP_003698944.1 | hypothetical protein | - |
| NGK_RS16310 (NGK_2093) | - | 1723062..1723301 (+) | 240 | WP_012503951.1 | membrane protein | - |
| NGK_RS09405 | comE | 1723935..1724330 (-) | 396 | WP_003703428.1 | helix-hairpin-helix domain-containing protein | Machinery gene |
| NGK_RS16090 (NGK_2096) | - | 1724435..1724551 (-) | 117 | Protein_1768 | competence protein ComE | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 13796.61 Da Isoelectric Point: 10.8790
>NTDB_id=31243 NGK_RS09405 WP_003703428.1 1723935..1724330(-) (comE) [Neisseria gonorrhoeae NCCP11945]
MSRGGATPYRFLLIRHIVARCGLLFATLKGKTMKKMFVLFCMLFSCAFSLAAVNINAASQQELEALPGIGPAKAKAIAEY
RAQNGAFKSVDDLIKVKGIGPAVLAKLKDQASVGAPAPKGPAKPVLPAVKK
MSRGGATPYRFLLIRHIVARCGLLFATLKGKTMKKMFVLFCMLFSCAFSLAAVNINAASQQELEALPGIGPAKAKAIAEY
RAQNGAFKSVDDLIKVKGIGPAVLAKLKDQASVGAPAPKGPAKPVLPAVKK
Nucleotide
Download Length: 396 bp
>NTDB_id=31243 NGK_RS09405 WP_003703428.1 1723935..1724330(-) (comE) [Neisseria gonorrhoeae NCCP11945]
TTGAGCCGGGGCGGGGCAACGCCGTACCGGTTTTTGTTAATCCGCCATATCGTCGCAAGATGCGGTTTGTTGTTTGCAAC
CCTTAAAGGAAAAACCATGAAAAAAATGTTTGTATTGTTCTGTATGCTGTTCTCCTGCGCCTTCTCCCTTGCGGCGGTAA
ACATCAATGCGGCTTCGCAGCAGGAGCTGGAGGCGCTGCCGGGCATAGGCCCGGCGAAGGCGAAGGCCATTGCGGAATAC
CGCGCGCAAAACGGCGCGTTCAAGTCTGTGGACGATTTGATCAAGGTGAAGGGCATCGGTCCGGCGGTGCTGGCGAAGCT
GAAAGACCAGGCTTCCGTCGGCGCGCCCGCACCAAAAGGCCCCGCCAAACCGGTGCTGCCTGCGGTTAAAAAATAG
TTGAGCCGGGGCGGGGCAACGCCGTACCGGTTTTTGTTAATCCGCCATATCGTCGCAAGATGCGGTTTGTTGTTTGCAAC
CCTTAAAGGAAAAACCATGAAAAAAATGTTTGTATTGTTCTGTATGCTGTTCTCCTGCGCCTTCTCCCTTGCGGCGGTAA
ACATCAATGCGGCTTCGCAGCAGGAGCTGGAGGCGCTGCCGGGCATAGGCCCGGCGAAGGCGAAGGCCATTGCGGAATAC
CGCGCGCAAAACGGCGCGTTCAAGTCTGTGGACGATTTGATCAAGGTGAAGGGCATCGGTCCGGCGGTGCTGGCGAAGCT
GAAAGACCAGGCTTCCGTCGGCGCGCCCGCACCAAAAGGCCCCGCCAAACCGGTGCTGCCTGCGGTTAAAAAATAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comE | Neisseria gonorrhoeae MS11 |
100 |
100 |
1 |
| comE | Neisseria gonorrhoeae MS11 |
100 |
100 |
1 |
| comE | Neisseria gonorrhoeae MS11 |
100 |
100 |
1 |
| comE | Neisseria gonorrhoeae MS11 |
100 |
100 |
1 |