Detailed information
Bioinformatically predicted
Overview
| Name | sinR | Type | Regulator |
| Locus tag | DXY22_RS15445 | Genome accession | NZ_CP031693 |
| Coordinates | 3041528..3041863 (+) | Length | 111 a.a. |
| NCBI ID | WP_003226345.1 | Uniprot ID | A0AAE2VGU9 |
| Organism | Bacillus subtilis strain SRCM101393 | ||
| Function | repression of rok; repression of degU; repression of spo0A (predicted from homology) Competence regulation |
||
Genomic Context
Location: 3036528..3046863
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DXY22_RS15425 (DXY22_03032) | gcvT | 3037120..3038208 (-) | 1089 | WP_015251720.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| DXY22_RS15430 (DXY22_03033) | hepAA | 3038650..3040323 (+) | 1674 | WP_004398544.1 | SNF2-related protein | - |
| DXY22_RS15435 (DXY22_03034) | yqhG | 3040344..3041138 (+) | 795 | WP_003230200.1 | YqhG family protein | - |
| DXY22_RS15440 (DXY22_03035) | sinI | 3041321..3041494 (+) | 174 | WP_003230187.1 | anti-repressor SinI | Regulator |
| DXY22_RS15445 (DXY22_03036) | sinR | 3041528..3041863 (+) | 336 | WP_003226345.1 | transcriptional regulator SinR | Regulator |
| DXY22_RS15450 (DXY22_03037) | tasA | 3041956..3042741 (-) | 786 | WP_015251717.1 | biofilm matrix protein TasA | - |
| DXY22_RS15455 (DXY22_03038) | sipW | 3042805..3043377 (-) | 573 | WP_003246088.1 | signal peptidase I SipW | - |
| DXY22_RS15460 (DXY22_03039) | tapA | 3043361..3044122 (-) | 762 | WP_015251716.1 | amyloid fiber anchoring/assembly protein TapA | - |
| DXY22_RS15465 (DXY22_03040) | yqzG | 3044394..3044720 (+) | 327 | WP_003246051.1 | YqzG/YhdC family protein | - |
| DXY22_RS15470 (DXY22_03041) | spoIITA | 3044762..3044941 (-) | 180 | WP_029726723.1 | YqzE family protein | - |
| DXY22_RS15475 (DXY22_03042) | comGG | 3045012..3045386 (-) | 375 | WP_015251714.1 | ComG operon protein ComGG | Machinery gene |
| DXY22_RS15480 | comGF | 3045387..3045770 (-) | 384 | WP_015251713.1 | ComG operon protein ComGF | Machinery gene |
| DXY22_RS15485 (DXY22_03044) | comGE | 3045796..3046143 (-) | 348 | WP_003230165.1 | ComG operon protein 5 | Machinery gene |
| DXY22_RS15490 (DXY22_03045) | comGD | 3046127..3046558 (-) | 432 | WP_004398628.1 | comG operon protein ComGD | Machinery gene |
| DXY22_RS15495 (DXY22_03046) | comGC | 3046548..3046844 (-) | 297 | WP_003230162.1 | comG operon protein ComGC | Machinery gene |
Sequence
Protein
Download Length: 111 a.a. Molecular weight: 12988.64 Da Isoelectric Point: 7.2023
>NTDB_id=310337 DXY22_RS15445 WP_003226345.1 3041528..3041863(+) (sinR) [Bacillus subtilis strain SRCM101393]
MIGQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLDEKHETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQKWRKSQKEE
MIGQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLDEKHETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQKWRKSQKEE
Nucleotide
Download Length: 336 bp
>NTDB_id=310337 DXY22_RS15445 WP_003226345.1 3041528..3041863(+) (sinR) [Bacillus subtilis strain SRCM101393]
TTGATTGGCCAGCGTATTAAACAATACCGTAAAGAAAAAGGCTACTCACTATCAGAACTAGCTGAAAAAGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAACGAAATCTACAAACGAACCCCTCCATTCAATTTCTCGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACTTTGCTCGATGAGAAACATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAGAAA
TTGGTTCGCGATGCGATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATC
CCAAAAAGAGGAGTAG
TTGATTGGCCAGCGTATTAAACAATACCGTAAAGAAAAAGGCTACTCACTATCAGAACTAGCTGAAAAAGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAACGAAATCTACAAACGAACCCCTCCATTCAATTTCTCGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACTTTGCTCGATGAGAAACATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAGAAA
TTGGTTCGCGATGCGATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATC
CCAAAAAGAGGAGTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sinR | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |