Detailed information
Bioinformatically predicted
Overview
| Name | ceuB | Type | Machinery gene |
| Locus tag | DWB95_RS09835 | Genome accession | NZ_CP031280 |
| Coordinates | 2023567..2024535 (-) | Length | 322 a.a. |
| NCBI ID | WP_017637112.1 | Uniprot ID | A0A653Z3V4 |
| Organism | Staphylococcus pasteuri strain 3C | ||
| Function | DNA uptake (predicted from homology) DNA binding and uptake |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 2021848..2053890 | 2023567..2024535 | within | 0 |
Gene organization within MGE regions
Location: 2021848..2053890
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DWB95_RS09825 (DWB95_09845) | - | 2021848..2022621 (-) | 774 | WP_046466457.1 | ATP-binding cassette domain-containing protein | - |
| DWB95_RS09830 (DWB95_09850) | - | 2022618..2023577 (-) | 960 | WP_126567463.1 | iron chelate uptake ABC transporter family permease subunit | - |
| DWB95_RS09835 (DWB95_09855) | ceuB | 2023567..2024535 (-) | 969 | WP_017637112.1 | ABC transporter permease | Machinery gene |
| DWB95_RS09840 (DWB95_09860) | nrdF | 2024745..2025719 (-) | 975 | WP_002450939.1 | class 1b ribonucleoside-diphosphate reductase subunit beta | - |
| DWB95_RS09845 (DWB95_09865) | nrdE | 2026110..2028215 (-) | 2106 | WP_126567461.1 | class 1b ribonucleoside-diphosphate reductase subunit alpha | - |
| DWB95_RS09850 (DWB95_09870) | nrdI | 2028178..2028576 (-) | 399 | WP_026083473.1 | class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI | - |
| DWB95_RS09855 (DWB95_09875) | - | 2029377..2030255 (+) | 879 | WP_046466454.1 | DMT family transporter | - |
| DWB95_RS09860 (DWB95_09880) | queF | 2030273..2030773 (+) | 501 | WP_017636674.1 | preQ(1) synthase | - |
| DWB95_RS09865 (DWB95_09885) | - | 2031105..2032610 (+) | 1506 | WP_017636673.1 | peptide MFS transporter | - |
| DWB95_RS09870 (DWB95_09890) | - | 2032759..2033688 (+) | 930 | WP_017636672.1 | diacylglycerol kinase family protein | - |
| DWB95_RS09875 (DWB95_09895) | - | 2033765..2034301 (-) | 537 | WP_029056470.1 | 5'-3'-deoxyribonucleotidase | - |
| DWB95_RS09880 (DWB95_09900) | hisC | 2034392..2035447 (-) | 1056 | WP_154874665.1 | histidinol-phosphate transaminase | - |
| DWB95_RS09885 (DWB95_09905) | - | 2035643..2037160 (-) | 1518 | WP_070452502.1 | ABC transporter permease/substrate-binding protein | - |
| DWB95_RS09890 (DWB95_09910) | - | 2037153..2038118 (-) | 966 | WP_126567458.1 | ABC transporter ATP-binding protein | - |
| DWB95_RS09895 (DWB95_09915) | recQ | 2038360..2040141 (-) | 1782 | WP_029056466.1 | DNA helicase RecQ | - |
| DWB95_RS09900 (DWB95_09920) | - | 2040152..2042041 (-) | 1890 | WP_186802353.1 | ABC-F family ATP-binding cassette domain-containing protein | - |
| DWB95_RS09905 (DWB95_09925) | - | 2042144..2042959 (+) | 816 | WP_017637518.1 | ZIP family metal transporter | - |
| DWB95_RS09910 (DWB95_09930) | ltaS | 2043101..2045041 (-) | 1941 | WP_154874669.1 | polyglycerol-phosphate lipoteichoic acid synthase LtaS | - |
| DWB95_RS09915 (DWB95_09935) | - | 2045460..2046464 (-) | 1005 | WP_029056463.1 | biotin-dependent carboxyltransferase family protein | - |
| DWB95_RS09920 (DWB95_09940) | - | 2046452..2047159 (-) | 708 | WP_029056462.1 | allophanate hydrolase subunit 1 | - |
| DWB95_RS09925 (DWB95_09945) | - | 2047180..2047386 (-) | 207 | WP_017637522.1 | hypothetical protein | - |
| DWB95_RS09930 (DWB95_09950) | - | 2047430..2048038 (-) | 609 | WP_154874671.1 | aminotransferase class IV | - |
| DWB95_RS09935 (DWB95_09955) | - | 2048038..2049183 (-) | 1146 | WP_108000705.1 | anthranilate synthase component I family protein | - |
| DWB95_RS09940 (DWB95_09960) | - | 2049167..2049760 (-) | 594 | WP_046466444.1 | aminodeoxychorismate/anthranilate synthase component II | - |
| DWB95_RS09945 (DWB95_09965) | queC | 2050170..2050841 (+) | 672 | WP_017637526.1 | 7-cyano-7-deazaguanine synthase QueC | - |
| DWB95_RS09950 (DWB95_09970) | queD | 2050844..2051263 (+) | 420 | WP_126567453.1 | 6-carboxytetrahydropterin synthase QueD | - |
| DWB95_RS09955 (DWB95_09975) | queE | 2051263..2051976 (+) | 714 | Protein_1948 | 7-carboxy-7-deazaguanine synthase QueE | - |
| DWB95_RS09960 (DWB95_09980) | - | 2052080..2052664 (+) | 585 | WP_029056457.1 | hypothetical protein | - |
| DWB95_RS09965 (DWB95_09985) | - | 2052766..2053890 (-) | 1125 | WP_154874673.1 | glycosyltransferase family 2 protein | - |
Sequence
Protein
Download Length: 322 a.a. Molecular weight: 35426.76 Da Isoelectric Point: 10.1815
>NTDB_id=305433 DWB95_RS09835 WP_017637112.1 2023567..2024535(-) (ceuB) [Staphylococcus pasteuri strain 3C]
MKFLLKGYVLLIFLVAFTVLSLFVGVSQISITDIFHLNSDQLNIILSSRIPRTVSILISGSTLGIAGLIMQQMMQNKFVS
PTTAGTMEWAKLGILLSLIFFPKGHILIKLIFAVICSVVGTYFFVKLVQLIKVKDVIFIPLLGIMLGGIVSSFTTFIALR
TNAVQSIGNWLNGNFAIITSGRYEVLYLSIPFLIITYIFANHFTIAGMGKDFSHNLGVNYEKIINIALFITATITALVVV
TVGTLPFLGLIVPNIISIYRGDHLKHALPHTMMLGAVFVLFSDIIGRLIVYPYEINIGLTIGVFGTIIFLILLMKGRGNY
AN
MKFLLKGYVLLIFLVAFTVLSLFVGVSQISITDIFHLNSDQLNIILSSRIPRTVSILISGSTLGIAGLIMQQMMQNKFVS
PTTAGTMEWAKLGILLSLIFFPKGHILIKLIFAVICSVVGTYFFVKLVQLIKVKDVIFIPLLGIMLGGIVSSFTTFIALR
TNAVQSIGNWLNGNFAIITSGRYEVLYLSIPFLIITYIFANHFTIAGMGKDFSHNLGVNYEKIINIALFITATITALVVV
TVGTLPFLGLIVPNIISIYRGDHLKHALPHTMMLGAVFVLFSDIIGRLIVYPYEINIGLTIGVFGTIIFLILLMKGRGNY
AN
Nucleotide
Download Length: 969 bp
>NTDB_id=305433 DWB95_RS09835 WP_017637112.1 2023567..2024535(-) (ceuB) [Staphylococcus pasteuri strain 3C]
ATGAAGTTTTTACTTAAGGGATATGTTTTACTCATCTTTCTCGTTGCGTTTACGGTTCTTTCTTTATTTGTTGGTGTTAG
CCAAATATCGATTACTGATATTTTCCATCTTAACAGCGACCAATTAAATATTATTTTATCGAGTCGTATTCCTCGAACAG
TTAGTATTCTCATATCAGGTAGTACATTGGGTATCGCTGGTTTAATTATGCAACAAATGATGCAAAATAAATTTGTAAGT
CCAACGACAGCAGGTACGATGGAATGGGCAAAATTAGGTATTTTATTATCTTTAATTTTCTTTCCTAAAGGACATATACT
TATCAAATTAATTTTTGCTGTTATATGCAGTGTAGTTGGAACTTATTTCTTTGTTAAATTAGTTCAACTTATTAAGGTAA
AAGATGTCATCTTTATTCCGTTGTTAGGTATTATGCTTGGTGGCATAGTTTCTAGTTTTACGACATTTATTGCGTTACGT
ACAAATGCAGTTCAAAGCATAGGTAATTGGTTGAATGGTAATTTTGCCATTATTACTAGTGGTCGTTACGAAGTATTATA
TTTAAGTATTCCGTTTTTAATAATTACATATATATTTGCGAACCATTTTACGATTGCGGGTATGGGCAAAGACTTCAGCC
ATAACTTAGGAGTTAACTATGAAAAAATAATTAACATCGCTTTATTTATAACTGCAACAATTACTGCGCTTGTTGTTGTC
ACTGTTGGTACATTACCATTTCTAGGGTTAATTGTTCCTAATATCATTTCAATTTATAGAGGAGACCATTTAAAACATGC
TTTACCTCATACAATGATGTTAGGTGCGGTCTTTGTGCTGTTTTCAGACATTATAGGTCGACTAATCGTGTACCCATACG
AAATTAACATCGGTTTAACTATAGGTGTGTTTGGAACTATTATATTCCTTATCTTATTGATGAAAGGTAGGGGTAATTAT
GCTAACTAA
ATGAAGTTTTTACTTAAGGGATATGTTTTACTCATCTTTCTCGTTGCGTTTACGGTTCTTTCTTTATTTGTTGGTGTTAG
CCAAATATCGATTACTGATATTTTCCATCTTAACAGCGACCAATTAAATATTATTTTATCGAGTCGTATTCCTCGAACAG
TTAGTATTCTCATATCAGGTAGTACATTGGGTATCGCTGGTTTAATTATGCAACAAATGATGCAAAATAAATTTGTAAGT
CCAACGACAGCAGGTACGATGGAATGGGCAAAATTAGGTATTTTATTATCTTTAATTTTCTTTCCTAAAGGACATATACT
TATCAAATTAATTTTTGCTGTTATATGCAGTGTAGTTGGAACTTATTTCTTTGTTAAATTAGTTCAACTTATTAAGGTAA
AAGATGTCATCTTTATTCCGTTGTTAGGTATTATGCTTGGTGGCATAGTTTCTAGTTTTACGACATTTATTGCGTTACGT
ACAAATGCAGTTCAAAGCATAGGTAATTGGTTGAATGGTAATTTTGCCATTATTACTAGTGGTCGTTACGAAGTATTATA
TTTAAGTATTCCGTTTTTAATAATTACATATATATTTGCGAACCATTTTACGATTGCGGGTATGGGCAAAGACTTCAGCC
ATAACTTAGGAGTTAACTATGAAAAAATAATTAACATCGCTTTATTTATAACTGCAACAATTACTGCGCTTGTTGTTGTC
ACTGTTGGTACATTACCATTTCTAGGGTTAATTGTTCCTAATATCATTTCAATTTATAGAGGAGACCATTTAAAACATGC
TTTACCTCATACAATGATGTTAGGTGCGGTCTTTGTGCTGTTTTCAGACATTATAGGTCGACTAATCGTGTACCCATACG
AAATTAACATCGGTTTAACTATAGGTGTGTTTGGAACTATTATATTCCTTATCTTATTGATGAAAGGTAGGGGTAATTAT
GCTAACTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ceuB | Campylobacter jejuni subsp. jejuni 81-176 |
48.438 |
99.379 |
0.481 |