Detailed information NTG0305259

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: DWB91_RS05715
• Genome accession: NZ_CP031266
• Coordinates: 1170402..1172774 (+)
• Length: 790 a.a.
• NCBI ID: WP_107368567.1
• Uniprot ID: -
• Organism: Staphylococcus agnetis strain 12B
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1165402..1177774

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DWB91_RS05690 (DWB91_05705)	-	1165716..1165901 (+)	186	WP_105995578.1	CsbD family protein	-
DWB91_RS11575	-	1165987..1166151 (+)	165	WP_164671788.1	hypothetical protein	-
DWB91_RS05695 (DWB91_05710)	-	1166203..1167213 (-)	1011	WP_145051681.1	LLM class flavin-dependent oxidoreductase	-
DWB91_RS05700 (DWB91_05715)	-	1167434..1168573 (+)	1140	WP_060551181.1	cysteine desulfurase family protein	-
DWB91_RS05705 (DWB91_05720)	mnmA	1168576..1169685 (+)	1110	WP_060551180.1	tRNA 2-thiouridine(34) synthase MnmA	-
DWB91_RS05710 (DWB91_05725)	-	1169724..1170398 (+)	675	WP_060551179.1	tetratricopeptide repeat protein	-
DWB91_RS05715 (DWB91_05730)	recD2	1170402..1172774 (+)	2373	WP_107368567.1	ATP-dependent RecD-like DNA helicase	Machinery gene
DWB91_RS05720 (DWB91_05735)	alaS	1173006..1175635 (+)	2630	Protein_1102	alanine--tRNA ligase	-
DWB91_RS05725 (DWB91_05740)	-	1175699..1175971 (+)	273	WP_039645438.1	IreB family regulatory phosphoprotein	-
DWB91_RS05730 (DWB91_05745)	ruvX	1175964..1176392 (+)	429	WP_037565451.1	Holliday junction resolvase RuvX	-
DWB91_RS05735 (DWB91_05750)	-	1176407..1176727 (+)	321	WP_105995584.1	DUF1292 domain-containing protein	-
DWB91_RS05740 (DWB91_05755)	-	1177059..1177703 (+)	645	WP_060551175.1	O-methyltransferase	-

Sequence

Protein

• Length: 790 a.a.
• Molecular weight: 89188.18 Da
• Isoelectric Point: 4.6128

>NTDB_id=305259 DWB91_RS05715 WP_107368567.1 1170402..1172774(+) (recD2) [Staphylococcus agnetis strain 12B]
MENPTLFEQSYIKGNIEVILFQNSDNYYTVLKVEVEDSNEDFETMATVVGYFPNIVEGETYTFKGQVAEHPRYGKQLKAE
TFQKEIPQTRDSIVQYLSSDLFKGVGKKTAESIVDTLGDNAIQSILNDASVLEQVPKLSKAKQQQIAEQVSQNQASEQIM
IRLNELGFGVKLAMDIYKFYKDETINVIDQNPYQLVYDIRGVGFQKADQLASLVGISYTHPNRLKAGIQYIVEEICIKQG
HTYLPKDTLMTESSTLLTKQHETAIDQTMLEDVLSQLIEEQRLINDNDHIAIPSLYYSELKSSQNIYKLMHNQVFMDTFD
QSDIQLHIGEIEESNGVTYAEAQKEALEAAMQNKMMILTGGPGTGKTTVIKGIVHLYAALHGISLNYDDYGDEDYPVVLA
APTGRASKRLHDATGLEAMTIHRLIGWNQDTKPEDILDNEIHAKLIIIDEMSMVDTWLFHQFMAAVPEDAQVVLVGDEDQ
LPSVGPGQVFKDLISSKSLKRINLKEVYRQQDGSSIIALAHNMKAGLNVDITERFHDRSFIPCHIDQIPEVVRKVVTNAV
SKGYDMSDIQVLAPMYRGNAGIHKLNKVLQDILNPIENDDTRAIHFGDIVYRKGDKVLQLVNRPNDNIFNGDIGVIVGIF
WAKENALNKDVVIVDYEGNEITYLKSDLTELTHAYCTSIHKAQGSEFPIVIMPIVKQYFRMLQKPILYTGLTRAKQSLVF
LGDSDAFNIGLKTEGQVRLTRQQSFLEQYFNSEETSSEVISLTEDTMYSIDPMINMQNVSPYDFMEIDNV

Nucleotide

• Length: 2373 bp

>NTDB_id=305259 DWB91_RS05715 WP_107368567.1 1170402..1172774(+) (recD2) [Staphylococcus agnetis strain 12B]
GTGGAAAACCCAACACTATTTGAACAGTCATATATCAAAGGGAATATCGAAGTCATTCTTTTTCAAAATAGTGATAATTA
CTATACGGTCCTCAAAGTAGAGGTTGAAGATTCTAATGAAGACTTTGAAACAATGGCAACAGTTGTTGGGTATTTTCCAA
ATATCGTTGAAGGCGAAACATATACTTTCAAAGGTCAAGTAGCAGAACATCCTCGGTACGGCAAACAATTAAAAGCAGAA
ACGTTTCAAAAAGAAATACCTCAAACGAGAGATTCTATTGTTCAATATTTATCAAGTGACCTGTTTAAAGGTGTGGGTAA
AAAAACAGCAGAATCCATTGTAGATACATTAGGTGACAATGCAATTCAGTCTATTTTAAATGACGCATCAGTTCTTGAAC
AAGTACCGAAATTGTCTAAAGCAAAGCAACAGCAAATTGCAGAACAAGTGTCTCAAAATCAAGCGAGTGAACAAATCATG
ATTCGCTTAAACGAACTTGGTTTTGGTGTGAAATTGGCCATGGATATTTATAAATTTTATAAGGATGAGACCATTAACGT
TATTGATCAAAATCCCTATCAACTCGTATATGATATACGTGGCGTAGGCTTTCAAAAAGCTGATCAACTTGCAAGTTTAG
TAGGTATTTCGTATACACACCCAAATCGACTTAAAGCAGGGATTCAATACATTGTAGAAGAAATCTGTATTAAACAGGGG
CATACGTATTTACCTAAAGATACGTTAATGACTGAGTCCTCTACCTTACTTACTAAACAACACGAAACAGCAATTGATCA
GACGATGCTTGAAGACGTACTTAGTCAACTTATAGAAGAGCAACGGTTGATTAATGATAATGATCATATCGCGATACCAA
GTTTGTATTATTCAGAACTTAAAAGTAGCCAAAATATCTATAAATTAATGCATAATCAAGTATTTATGGATACGTTTGAT
CAATCAGACATTCAATTACATATTGGTGAAATTGAAGAATCAAATGGCGTGACTTATGCTGAGGCACAAAAAGAAGCACT
TGAAGCTGCAATGCAGAATAAAATGATGATTTTAACTGGTGGTCCAGGGACGGGTAAAACGACAGTAATCAAAGGGATTG
TACACCTCTATGCGGCCTTACATGGTATTTCTTTAAATTATGACGATTACGGAGATGAAGATTACCCCGTGGTCCTCGCA
GCACCTACTGGTCGTGCATCAAAAAGGCTACATGATGCGACGGGTCTTGAGGCTATGACGATTCATCGCTTGATAGGTTG
GAATCAAGATACCAAGCCAGAAGATATTCTTGATAATGAAATTCATGCAAAGCTTATCATTATTGATGAAATGTCAATGG
TGGATACATGGCTATTTCATCAATTTATGGCAGCAGTTCCTGAAGATGCACAAGTTGTATTAGTTGGTGATGAGGATCAA
TTACCATCAGTAGGTCCAGGACAAGTATTTAAAGATTTAATCTCATCAAAATCATTAAAGCGCATTAATTTAAAAGAAGT
ATACCGCCAACAAGATGGTTCAAGTATTATTGCACTTGCTCATAACATGAAGGCGGGTTTAAACGTAGACATTACCGAGC
GGTTTCATGATCGATCCTTTATTCCTTGTCATATTGATCAAATTCCAGAAGTTGTTCGTAAAGTCGTAACAAATGCCGTG
AGTAAAGGTTATGATATGTCTGATATTCAAGTACTTGCACCAATGTACCGTGGGAATGCGGGTATTCATAAGCTCAATAA
AGTCCTACAAGATATTTTAAATCCAATTGAAAACGATGATACAAGAGCAATACACTTTGGAGATATTGTGTACCGAAAAG
GTGACAAAGTACTTCAACTTGTTAATCGACCGAATGATAATATTTTTAATGGAGATATTGGTGTCATTGTTGGTATATTT
TGGGCGAAGGAAAATGCACTGAACAAAGATGTGGTCATTGTGGATTACGAAGGTAATGAGATTACGTATTTAAAATCGGA
TCTAACAGAATTAACACATGCGTATTGTACGTCAATTCATAAAGCGCAAGGGTCAGAATTTCCAATCGTCATTATGCCGA
TAGTCAAGCAATATTTTCGGATGCTTCAAAAGCCAATTCTTTATACTGGATTAACCCGTGCAAAGCAATCACTTGTATTT
TTAGGAGATTCAGATGCTTTCAATATTGGTTTGAAAACGGAAGGCCAAGTGAGACTCACGCGGCAACAATCCTTTTTAGA
ACAATATTTTAATTCTGAAGAGACATCGAGTGAAGTCATTTCATTAACTGAAGACACAATGTATAGCATTGATCCAATGA
TTAATATGCAAAATGTAAGCCCATACGATTTTATGGAAATTGACAATGTTTAA

Domains

Predicted by InterproScan.

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (585-655)

• AAA domain (AAA_30) (339-544)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (673-720)

• Helix-hairpin-helix containing domain (HHH_RecD2) (153-243)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	48.985	99.747	0.489