Detailed information    

insolico Bioinformatically predicted

Overview


Name   coiA   Type   Machinery gene
Locus tag   DS740_RS06140 Genome accession   NZ_CP030937
Coordinates   1188223..1189374 (+) Length   383 a.a.
NCBI ID   WP_069703690.1    Uniprot ID   -
Organism   Bacillus sp. DM2     
Function   homologous recombination; DNA uptake (predicted from homology)   
Homologous recombination DNA binding and uptake

Genomic Context


Location: 1183223..1194374
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DS740_RS06115 (DS740_06115) - 1183895..1185112 (+) 1218 WP_080477793.1 MFS transporter -
  DS740_RS06120 (DS740_06120) - 1185276..1185854 (+) 579 WP_003224597.1 GNAT family N-acetyltransferase -
  DS740_RS06125 (DS740_06125) spx 1186035..1186430 (+) 396 WP_014476435.1 transcriptional regulator Spx -
  DS740_RS06130 (DS740_06130) - 1186473..1187129 (-) 657 WP_003232944.1 TerC family protein -
  DS740_RS22680 - 1187299..1187439 (+) 141 WP_119122854.1 hypothetical protein -
  DS740_RS06135 (DS740_06135) mecA 1187406..1188062 (+) 657 WP_003232942.1 adaptor protein MecA Regulator
  DS740_RS22685 - 1188057..1188179 (-) 123 WP_003232940.1 hypothetical protein -
  DS740_RS06140 (DS740_06140) coiA 1188223..1189374 (+) 1152 WP_069703690.1 competence protein CoiA Machinery gene
  DS740_RS06145 (DS740_06145) pepF 1189604..1191433 (+) 1830 WP_003245178.1 oligoendopeptidase F -
  DS740_RS06150 (DS740_06150) - 1191471..1191638 (-) 168 WP_003244944.1 hypothetical protein -
  DS740_RS06160 (DS740_06160) spxH 1191952..1192851 (-) 900 WP_003245184.1 protease adaptor protein SpxH -
  DS740_RS06165 (DS740_06165) - 1192848..1193246 (-) 399 WP_003232928.1 group 2 truncated hemoglobin YjbI -
  DS740_RS06170 (DS740_06170) cwlQ 1193501..1194235 (-) 735 WP_041340378.1 bifunctional muramidase/murein lytic transglycosylase -

Sequence


Protein


Download         Length: 383 a.a.        Molecular weight: 44740.89 Da        Isoelectric Point: 10.1093

>NTDB_id=302589 DS740_RS06140 WP_069703690.1 1188223..1189374(+) (coiA) [Bacillus sp. DM2]
MFSAVTEDGQMFHLLGAQQNQKLKRRRFFCPVCGGELAVKLGLQKAPHFAHKQNKSCSIDIEPESAYHLEGKRQLYVWLK
TQRASPILEPYIRTINQRPDVMARIKEHMLAVEYQCATIAPDVFQKRTEGFKQKGIIPQWIMGYSRLKRTASSFYQLSAF
HWQFINASPYRELICYCPERRSFLRLSHIIPFYTNHSYSSVQTIPIHRAGAGDLFFTEPKPSIQYSGWTKAIHRFRHKPH
RFNSKETNRLRLLFYEKRQTPFSFLPTEVFVPVRKGAVFKSPVFVWQGFLYLFMTDLGGKRAPIRFSAVLQQCKLHIHNK
NIALRSECSEECLSEAVKQYIDFLCKKGFLRETQKEVYVLNQPAGGIHSMQDLIERDRSCFIE

Nucleotide


Download         Length: 1152 bp        

>NTDB_id=302589 DS740_RS06140 WP_069703690.1 1188223..1189374(+) (coiA) [Bacillus sp. DM2]
TTGTTTAGTGCTGTGACTGAAGACGGCCAAATGTTTCACCTTCTAGGCGCTCAGCAAAACCAGAAATTAAAGCGGAGACG
GTTCTTCTGTCCGGTATGCGGGGGAGAGCTAGCTGTGAAGCTCGGACTTCAAAAAGCGCCGCATTTTGCCCATAAACAGA
ACAAGTCCTGCTCCATAGACATCGAACCGGAAAGCGCCTACCACTTAGAAGGAAAAAGACAGCTGTATGTATGGCTGAAA
ACGCAACGGGCTTCACCAATATTGGAGCCGTATATAAGGACAATCAACCAAAGACCGGACGTCATGGCAAGAATCAAGGA
GCATATGCTTGCTGTTGAATATCAATGTGCCACTATCGCTCCAGATGTCTTTCAAAAGCGGACAGAGGGCTTCAAACAAA
AAGGAATCATCCCGCAGTGGATTATGGGATACAGCCGCTTAAAACGGACTGCTTCGTCCTTTTATCAGCTTTCAGCTTTT
CATTGGCAGTTTATCAATGCAAGTCCATACAGAGAACTGATATGTTATTGTCCTGAAAGGCGTTCTTTTCTCCGGCTCAG
CCACATCATTCCATTCTATACAAACCATTCTTATTCCTCAGTCCAAACGATCCCTATCCATCGGGCAGGTGCAGGCGATC
TTTTTTTCACTGAACCGAAACCCTCAATTCAATATTCAGGCTGGACGAAAGCGATTCACCGTTTTCGCCATAAACCCCAT
CGGTTTAACTCAAAGGAAACAAATCGCCTTAGGCTGCTGTTTTATGAGAAACGGCAGACGCCTTTTTCTTTTCTGCCGAC
TGAAGTGTTTGTTCCTGTTAGAAAAGGGGCAGTTTTTAAGAGTCCGGTTTTTGTGTGGCAGGGGTTTCTTTATTTGTTTA
TGACGGATCTTGGAGGTAAACGTGCGCCAATTCGTTTTTCAGCCGTTTTGCAGCAGTGCAAACTGCACATTCATAATAAG
AACATTGCACTCAGGTCCGAATGCAGCGAAGAGTGTCTTTCAGAAGCGGTTAAACAGTATATTGATTTTTTGTGCAAGAA
GGGATTTTTAAGGGAGACTCAGAAAGAAGTATATGTGCTGAATCAGCCTGCAGGAGGCATACACTCCATGCAGGATCTCA
TAGAAAGAGACCGCAGCTGTTTTATAGAATGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Bacillus subtilis subsp. subtilis str. 168

99.196

97.389

0.966


Multiple sequence alignment