Detailed information NTG0030009

Bioinformatically predicted

Overview

• Name: coiA
• Type: Machinery gene
• Locus tag: SPH_RS05225
• Genome accession: NC_010380
• Coordinates: 994813..995766 (+)
• Length: 317 a.a.
• NCBI ID: WP_000495910.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae Hungary19A-6
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 989813..1000766

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SPH_RS05200 (SPH_1074)	rpmG	990556..990705 (+)	150	WP_001810029.1	50S ribosomal protein L33	-
SPH_RS05205 (SPH_1075)	secG	990745..990978 (+)	234	WP_000282517.1	preprotein translocase subunit SecG	-
SPH_RS05210 (SPH_1076)	rnr	991080..993434 (+)	2355	WP_000654893.1	ribonuclease R	-
SPH_RS05215 (SPH_1077)	smpB	993397..993864 (+)	468	WP_001051750.1	SsrA-binding protein SmpB	-
SPH_RS05220 (SPH_1078)	tehB	993880..994740 (+)	861	WP_000413763.1	SAM-dependent methyltransferase TehB	-
SPH_RS05225 (SPH_1079)	coiA	994813..995766 (+)	954	WP_000495910.1	competence protein CoiA	Machinery gene
SPH_RS05230 (SPH_1080)	pepF	995785..997587 (+)	1803	WP_000244135.1	oligoendopeptidase F	Regulator
SPH_RS05235 (SPH_1081)	-	997589..998302 (+)	714	WP_000230399.1	O-methyltransferase	-
SPH_RS05240 (SPH_1082)	prsA	998369..999310 (+)	942	WP_000727935.1	peptidylprolyl isomerase PrsA	-
SPH_RS05245 (SPH_1083)	-	999429..999758 (-)	330	Protein_1014	IS3 family transposase	-
SPH_RS13200	-	1000181..1000276 (+)	96	Protein_1015	IS630 family transposase	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 38269.90 Da
• Isoelectric Point: 8.9763

>NTDB_id=30009 SPH_RS05225 WP_000495910.1 994813..995766(+) (coiA) [Streptococcus pneumoniae Hungary19A-6]
MFVARDARGELVNVLEDKLEKQAYTCPACGGQLHLRQGPSVRTHFAHKSLKDCDFFFENESPEHLANKESLYHWLKKETK
VQLEYPLSELKQIADVFVNGNLALEVQCSPLPQKVLKERSEGYRSQGYQVLWLLGQKLWLKERLTRLQQGFLYFSQNMGF
YVWELDKEKQVLRLKYLIYQDLRGKLHYQIKEFSYGQGSLLEILRLPYKRQKISHFTVSEDKDICRYIRQQLYYQNLFWM
KEQAEAYQKGENILTYGLKEWYPQIRPIVGKFFQIEQDLTSYYQYFYTYYQKNPQNDWQKLYPPAFYQQYFLKNMVE

Nucleotide

• Length: 954 bp

>NTDB_id=30009 SPH_RS05225 WP_000495910.1 994813..995766(+) (coiA) [Streptococcus pneumoniae Hungary19A-6]
ATGTTTGTTGCGAGAGATGCTAGGGGAGAATTGGTAAATGTGTTAGAGGATAAACTTGAGAAGCAAGCATACACCTGCCC
AGCTTGTGGAGGCCAGCTCCATTTGCGTCAAGGACCAAGTGTACGGACGCATTTTGCCCATAAATCTTTAAAAGACTGTG
ATTTTTTCTTTGAAAATGAAAGTCCAGAACACCTGGCCAATAAGGAATCCCTCTATCACTGGTTGAAAAAAGAGACAAAG
GTTCAATTAGAGTACCCGCTTTCAGAACTTAAACAGATTGCGGATGTATTTGTAAATGGCAATCTAGCTCTAGAAGTTCA
GTGTAGTCCCTTGCCTCAGAAAGTCCTTAAAGAGCGAAGTGAGGGCTATCGTAGTCAGGGTTACCAAGTACTGTGGTTGC
TGGGTCAAAAACTGTGGCTCAAGGAGCGTTTGACTCGTCTACAGCAAGGTTTTCTTTATTTCAGTCAAAACATGGGCTTT
TATGTTTGGGAATTAGACAAGGAAAAACAAGTTTTAAGACTCAAATACCTGATTTACCAGGATCTCCGCGGTAAACTCCA
TTATCAAATCAAGGAATTTTCCTATGGTCAAGGTAGTTTATTGGAAATATTGCGTCTTCCCTATAAGAGACAAAAAATAT
CTCATTTTACAGTTTCTGAGGACAAGGACATCTGTCGCTATATCCGGCAACAACTTTATTATCAAAATCTCTTTTGGATG
AAAGAACAAGCAGAAGCCTATCAAAAGGGAGAAAATATCCTGACTTATGGACTGAAAGAATGGTATCCACAAATTCGACC
AATAGTGGGCAAATTTTTCCAGATTGAACAAGACTTGACTAGCTATTATCAGTACTTTTATACCTATTACCAAAAAAATC
CTCAAAATGATTGGCAAAAGCTTTATCCACCAGCCTTTTATCAGCAATATTTCTTGAAAAATATGGTAGAATAA

Domains

Predicted by InterproScan.

• Competence protein CoiA-like family (CoiA_nuc) (13-263)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
coiA	Streptococcus pneumoniae TIGR4	99.685	100	0.997
coiA	Streptococcus pneumoniae Rx1	99.054	100	0.991
coiA	Streptococcus pneumoniae D39	99.054	100	0.991
coiA	Streptococcus pneumoniae R6	99.054	100	0.991
coiA	Streptococcus mitis NCTC 12261	89.59	100	0.896
coiA	Lactococcus lactis subsp. cremoris KW2	42.593	100	0.435