Detailed information NTG0291390

Bioinformatically predicted

Overview

• Name: comGD/cglD
• Type: Machinery gene
• Locus tag: DG474_RS00835
• Genome accession: NZ_CP029257
• Coordinates: 161562..161996 (+)
• Length: 144 a.a.
• NCBI ID: WP_255778316.1
• Uniprot ID: -
• Organism: Streptococcus oralis strain CCUG 53468
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 156562..166996

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DG474_RS00810 (DG474_00815)	nagA	157636..158787 (+)	1152	WP_001134441.1	N-acetylglucosamine-6-phosphate deacetylase	-
DG474_RS00815 (DG474_00820)	-	158941..159306 (+)	366	WP_000286399.1	DUF1033 family protein	-
DG474_RS00820 (DG474_00825)	comGA/cglA/cilD	159369..160310 (+)	942	WP_255778312.1	competence type IV pilus ATPase ComGA	Machinery gene
DG474_RS00825 (DG474_00830)	comGB/cglB	160258..161274 (+)	1017	WP_255778313.1	competence type IV pilus assembly protein ComGB	Machinery gene
DG474_RS00830 (DG474_00835)	comGC/cglC	161276..161599 (+)	324	WP_255778314.1	competence type IV pilus major pilin ComGC	Machinery gene
DG474_RS00835 (DG474_00840)	comGD/cglD	161562..161996 (+)	435	WP_255778316.1	competence type IV pilus minor pilin ComGD	Machinery gene
DG474_RS00840 (DG474_00845)	comGE/cglE	161959..162261 (+)	303	WP_255778318.1	competence type IV pilus minor pilin ComGE	Machinery gene
DG474_RS00845 (DG474_00850)	comGF/cglF	162224..162685 (+)	462	WP_255778319.1	competence type IV pilus minor pilin ComGF	Machinery gene
DG474_RS00850 (DG474_00855)	comGG/cglG	162663..163076 (+)	414	WP_139658263.1	competence type IV pilus minor pilin ComGG	Machinery gene
DG474_RS00855 (DG474_00860)	-	163109..163699 (+)	591	WP_255778320.1	class I SAM-dependent methyltransferase	-
DG474_RS00860 (DG474_00865)	comYH	163758..164711 (+)	954	WP_255778321.1	class I SAM-dependent methyltransferase	Machinery gene
DG474_RS00865 (DG474_00870)	-	164762..165952 (+)	1191	WP_000167792.1	acetate kinase	-
DG474_RS00870 (DG474_00875)	rnpA	166102..166473 (+)	372	WP_000748120.1	ribonuclease P protein component	-

Sequence

Protein

• Length: 144 a.a.
• Molecular weight: 15886.33 Da
• Isoelectric Point: 10.4335

>NTDB_id=291390 DG474_RS00835 WP_255778316.1 161562..161996(+) (comGD/cglD) [Streptococcus oralis strain CCUG 53468]
MQNKKQVKLLQIKAFTMLESLLVLGLVSILALGLSGSVQSSFAVVEEQIFFMEFEELYRETQKRSVASQQKTSLNLDGQT
ISNGNQNLTVPKGIQAPSGQSIIFDRAGGNSSLAKVEFQTSKGAIRYQLYLGNGKIKRIKETKN

Nucleotide

• Length: 435 bp

>NTDB_id=291390 DG474_RS00835 WP_255778316.1 161562..161996(+) (comGD/cglD) [Streptococcus oralis strain CCUG 53468]
ATGCAAAACAAAAAACAAGTCAAACTGTTGCAGATTAAGGCCTTTACTATGCTTGAGAGTCTCTTGGTTTTGGGACTTGT
GAGTATCCTTGCCTTGGGCTTGTCCGGTTCTGTTCAGTCCAGTTTTGCAGTGGTGGAAGAGCAGATTTTCTTTATGGAGT
TTGAAGAACTCTATCGGGAAACACAAAAACGCAGTGTAGCCAGTCAGCAAAAGACCAGCTTGAACTTAGATGGACAGACG
ATCAGCAATGGCAATCAAAACTTGACCGTTCCTAAAGGGATTCAGGCACCATCGGGACAAAGCATTATATTTGACCGAGC
TGGGGGCAATTCATCCCTGGCTAAGGTTGAATTTCAGACCAGCAAAGGAGCGATTCGTTATCAATTATATCTAGGAAATG
GAAAAATTAAACGCATTAAGGAAACAAAAAATTAG

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGD/cglD	Streptococcus mitis NCTC 12261	92.361	100	0.924
comGD/cglD	Streptococcus pneumoniae Rx1	94.737	92.361	0.875
comGD/cglD	Streptococcus pneumoniae D39	94.737	92.361	0.875
comGD/cglD	Streptococcus pneumoniae R6	94.737	92.361	0.875
comGD/cglD	Streptococcus pneumoniae TIGR4	93.985	92.361	0.868
comGD/cglD	Streptococcus mitis SK321	93.985	92.361	0.868
comYD	Streptococcus gordonii str. Challis substr. CH1	58.14	89.583	0.521
comYD	Streptococcus mutans UA140	48.837	89.583	0.437
comYD	Streptococcus mutans UA159	48.837	89.583	0.437