Detailed information NTG0289983

Bioinformatically predicted

Overview

• Name: comQ
• Type: Regulator
• Locus tag: DDT09_RS15250
• Genome accession: NZ_CP029070
• Coordinates: 3075793..3076677 (-)
• Length: 294 a.a.
• NCBI ID: WP_061862640.1
• Uniprot ID: -
• Organism: Bacillus amyloliquefaciens strain ALB69
• Function: modification of ComX; production of ComX (predicted from homology) Competence regulation

Genomic Context

Location: 3070793..3081677

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DDT09_RS15215 (DDT09_15215)	-	3071000..3071476 (+)	477	WP_007408672.1	Na+/H+ antiporter subunit E	-
DDT09_RS15220 (DDT09_15220)	-	3071476..3071760 (+)	285	WP_012118311.1	Na(+)/H(+) antiporter subunit F1	-
DDT09_RS15225 (DDT09_15225)	mnhG	3071744..3072118 (+)	375	WP_003152056.1	monovalent cation/H(+) antiporter subunit G	-
DDT09_RS15230 (DDT09_15230)	-	3072158..3072541 (-)	384	WP_007613430.1	hotdog fold thioesterase	-
DDT09_RS15235 (DDT09_15235)	comA	3072563..3073207 (-)	645	WP_003152052.1	response regulator transcription factor	Regulator
DDT09_RS15240 (DDT09_15240)	comP	3073288..3075597 (-)	2310	WP_061862531.1	histidine kinase	Regulator
DDT09_RS15245 (DDT09_15245)	comX	3075617..3075793 (-)	177	WP_007408675.1	competence pheromone ComX	-
DDT09_RS15250 (DDT09_15250)	comQ	3075793..3076677 (-)	885	WP_061862640.1	class 1 isoprenoid biosynthesis enzyme	Regulator
DDT09_RS15255 (DDT09_15255)	degQ	3076862..3077002 (-)	141	WP_003152043.1	degradation enzyme regulation protein DegQ	Regulator
DDT09_RS15265 (DDT09_15265)	-	3077468..3077809 (+)	342	WP_061862532.1	hypothetical protein	-
DDT09_RS15270 (DDT09_15270)	-	3077816..3079039 (-)	1224	WP_007408678.1	EAL and HDOD domain-containing protein	-
DDT09_RS15275 (DDT09_15275)	-	3079169..3080635 (-)	1467	WP_020954301.1	nicotinate phosphoribosyltransferase	-
DDT09_RS15280 (DDT09_15280)	-	3080653..3081204 (-)	552	WP_003152033.1	isochorismatase family cysteine hydrolase	-

Sequence

Protein

• Length: 294 a.a.
• Molecular weight: 33774.73 Da
• Isoelectric Point: 5.9247

>NTDB_id=289983 DDT09_RS15250 WP_061862640.1 3075793..3076677(-) (comQ) [Bacillus amyloliquefaciens strain ALB69]
MKSIIEQNIFNQHLLQLLLGFVESRKYLTFAESALLHYEVFGGRDFKTAEKLAAGIEILTLSADIIDDLEDEDNKQALWM
KIDRSEALSAAFSLYTAGLQGINSINMNPFILSYILKYTQDAMQGQHDDIINKPEKEDESLEVIRLKCGSLFALSNVAGT
MLATGKYNETVETYSYYKGMFEQIYSDYLALFSSKRSDILKDKHTLINLYLKRLFNEPSEKLVRMFSHRETHLKFISDKN
NFIQTLTDAGVTQYVSVLHQLYKQKCENAIEILNLETSKIDKLKKYVVNRGIEV

Nucleotide

• Length: 885 bp

>NTDB_id=289983 DDT09_RS15250 WP_061862640.1 3075793..3076677(-) (comQ) [Bacillus amyloliquefaciens strain ALB69]
ATGAAGAGTATAATAGAGCAAAACATATTTAATCAACATTTACTACAGCTTCTTCTTGGGTTTGTTGAATCCAGAAAATA
TTTAACCTTTGCTGAATCTGCTTTATTGCATTATGAAGTTTTTGGCGGAAGGGATTTTAAGACTGCTGAGAAACTTGCGG
CGGGAATTGAAATTCTTACGCTTTCCGCCGATATTATTGATGATCTTGAAGATGAAGATAACAAACAAGCTCTTTGGATG
AAGATAGACCGTTCAGAAGCTTTAAGCGCAGCTTTTTCATTATACACAGCAGGGCTGCAGGGGATTAATTCAATTAACAT
GAATCCTTTTATTCTTTCTTACATACTGAAATATACACAAGACGCTATGCAAGGACAACACGATGATATAATCAATAAGC
CAGAGAAAGAAGATGAAAGTTTAGAGGTCATTAGATTAAAATGCGGGAGTCTATTCGCTCTATCCAATGTGGCAGGTACT
ATGTTAGCAACTGGAAAGTATAATGAAACTGTTGAAACGTATTCCTATTACAAAGGAATGTTTGAACAGATATATAGTGA
TTATCTGGCTCTTTTCAGCTCTAAACGCAGTGATATTTTAAAAGATAAACACACGTTAATCAACTTGTACCTTAAGAGGC
TGTTTAACGAGCCTTCTGAAAAATTGGTTCGTATGTTTTCTCATAGAGAAACACACCTTAAGTTTATATCTGATAAAAAC
AATTTTATTCAGACATTAACTGATGCAGGTGTTACTCAGTATGTTTCAGTTTTACACCAATTGTATAAGCAAAAATGTGA
AAATGCTATAGAGATACTAAATCTTGAAACCAGTAAAATAGATAAATTGAAAAAATATGTAGTTAATAGGGGGATTGAAG
TATAA

Domains

Predicted by InterproScan.

• Polyprenyl synthetase (polyprenyl_synt) (35-229)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comQ	Bacillus subtilis subsp. subtilis str. 168	62.456	96.939	0.605