Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   C7M29_RS20870 Genome accession   NZ_CP028217
Coordinates   555042..555182 (-) Length   46 a.a.
NCBI ID   WP_229762786.1    Uniprot ID   -
Organism   Bacillus subtilis strain SRCM102751     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 550042..560182
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C7M29_RS20865 - 553924..555096 (-) 1173 Protein_539 condensation domain-containing protein -
  C7M29_RS20870 comS 555042..555182 (-) 141 WP_229762786.1 competence protein ComS Regulator
  C7M29_RS20875 srfAB 555274..558318 (-) 3045 Protein_541 surfactin non-ribosomal peptide synthetase SrfAB -

Sequence

Protein


Download         Length: 46 a.a.        Molecular weight: 5304.14 Da        Isoelectric Point: 9.2422

>NTDB_id=283388 C7M29_RS20870 WP_229762786.1 555042..555182(-) (comS) [Bacillus subtilis strain SRCM102751]
MNRSGKHLISSIILYPRPSGECIFSISLDKQTQATTSPLYFCWREK

Nucleotide


Download         Length: 141 bp        

>NTDB_id=283388 C7M29_RS20870 WP_229762786.1 555042..555182(-) (comS) [Bacillus subtilis strain SRCM102751]
TTGAATCGATCAGGCAAGCATCTTATCAGCAGCATTATCCTGTATCCCCGGCCCAGCGGAGAATGTATATTCTCAATCAG
CTTGGACAAGCAAACACAAGCTACAACGTCCCCGCTGTACTTCTGCTGGAGGGAGAAGTAG

Domains

Predicted by InterproScan.

Bacillus competence protein S (ComS)

(1-44)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

97.826

100

0.978

Multiple sequence alignment