Detailed information
Bioinformatically predicted
Overview
| Name | fimU | Type | Machinery gene |
| Locus tag | C6N19_RS02825 | Genome accession | NZ_CP027250 |
| Coordinates | 352241..352714 (+) | Length | 157 a.a. |
| NCBI ID | WP_016802756.1 | Uniprot ID | A0A1C2SAU9 |
| Organism | Acinetobacter pittii strain WCHAP100004 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 347241..357714
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C6N19_RS02800 (C6N19_02820) | spoT | 347703..349808 (-) | 2106 | WP_002116807.1 | RelA/SpoT family protein | - |
| C6N19_RS02805 (C6N19_02825) | - | 349824..349979 (-) | 156 | WP_014207816.1 | hypothetical protein | - |
| C6N19_RS02810 (C6N19_02830) | rpoZ | 350018..350296 (-) | 279 | WP_002116990.1 | DNA-directed RNA polymerase subunit omega | - |
| C6N19_RS02815 (C6N19_02835) | gmk | 350369..350998 (-) | 630 | WP_002116973.1 | guanylate kinase | - |
| C6N19_RS02820 (C6N19_02840) | ispH | 351121..352071 (+) | 951 | WP_002116992.1 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | - |
| C6N19_RS02825 (C6N19_02845) | fimU | 352241..352714 (+) | 474 | WP_016802756.1 | pilus assembly FimT family protein | Machinery gene |
| C6N19_RS02830 (C6N19_02850) | pilV | 352708..353268 (+) | 561 | WP_080564113.1 | type IV pilus modification protein PilV | Machinery gene |
| C6N19_RS02835 (C6N19_02855) | pilW | 353268..354269 (+) | 1002 | WP_002116811.1 | PilW family protein | Machinery gene |
| C6N19_RS02840 (C6N19_02860) | pilX | 354266..355075 (+) | 810 | WP_005078460.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
Sequence
Protein
Download Length: 157 a.a. Molecular weight: 16939.62 Da Isoelectric Point: 7.7942
>NTDB_id=276022 C6N19_RS02825 WP_016802756.1 352241..352714(+) (fimU) [Acinetobacter pittii strain WCHAP100004]
MRGIIPQDGFTLVELMVTIAVMAIIAMMAAPSMSNLLESKRLDGNQRDLINTLSEAKNQAILGRQDVSINLNSTALNTPT
SLNWKADSNNSLELKNIAADGTQSSLTATTLTFNANGVITNITQDTLLSICNSKINKKKILILTKLGTLIFKAEETC
MRGIIPQDGFTLVELMVTIAVMAIIAMMAAPSMSNLLESKRLDGNQRDLINTLSEAKNQAILGRQDVSINLNSTALNTPT
SLNWKADSNNSLELKNIAADGTQSSLTATTLTFNANGVITNITQDTLLSICNSKINKKKILILTKLGTLIFKAEETC
Nucleotide
Download Length: 474 bp
>NTDB_id=276022 C6N19_RS02825 WP_016802756.1 352241..352714(+) (fimU) [Acinetobacter pittii strain WCHAP100004]
ATGAGGGGAATTATTCCGCAAGACGGGTTCACCTTGGTTGAGCTTATGGTGACGATTGCGGTCATGGCTATTATCGCGAT
GATGGCTGCACCATCTATGTCGAATTTATTAGAAAGCAAACGACTAGATGGAAACCAACGAGATCTAATCAATACTTTAT
CGGAAGCAAAGAACCAAGCCATACTTGGTCGACAAGATGTATCCATTAATCTGAATTCAACAGCTTTAAATACTCCCACT
TCCTTGAATTGGAAAGCTGATTCCAATAACAGTCTTGAGCTTAAAAATATCGCTGCTGATGGTACGCAGAGTTCATTAAC
AGCAACGACTCTAACTTTTAATGCGAATGGGGTGATAACCAATATTACCCAAGATACACTTTTATCTATTTGTAATTCAA
AAATAAATAAAAAGAAAATTCTTATTTTAACAAAGCTTGGCACATTAATTTTTAAAGCTGAGGAGACATGTTAA
ATGAGGGGAATTATTCCGCAAGACGGGTTCACCTTGGTTGAGCTTATGGTGACGATTGCGGTCATGGCTATTATCGCGAT
GATGGCTGCACCATCTATGTCGAATTTATTAGAAAGCAAACGACTAGATGGAAACCAACGAGATCTAATCAATACTTTAT
CGGAAGCAAAGAACCAAGCCATACTTGGTCGACAAGATGTATCCATTAATCTGAATTCAACAGCTTTAAATACTCCCACT
TCCTTGAATTGGAAAGCTGATTCCAATAACAGTCTTGAGCTTAAAAATATCGCTGCTGATGGTACGCAGAGTTCATTAAC
AGCAACGACTCTAACTTTTAATGCGAATGGGGTGATAACCAATATTACCCAAGATACACTTTTATCTATTTGTAATTCAA
AAATAAATAAAAAGAAAATTCTTATTTTAACAAAGCTTGGCACATTAATTTTTAAAGCTGAGGAGACATGTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| fimU | Acinetobacter baumannii D1279779 |
87.898 |
100 |
0.879 |