Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | RK78_RS11165 | Genome accession | NZ_CP026066 |
| Coordinates | 2219526..2219825 (-) | Length | 99 a.a. |
| NCBI ID | WP_000844413.1 | Uniprot ID | X5E258 |
| Organism | Staphylococcus aureus strain FDAARGOS_20 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 2214526..2224825
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RK78_RS11140 (RK78_011140) | gcvPA | 2215738..2217084 (-) | 1347 | WP_000019697.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
| RK78_RS11145 (RK78_011145) | gcvT | 2217104..2218195 (-) | 1092 | WP_000093347.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| RK78_RS11150 (RK78_011150) | - | 2218354..2218878 (-) | 525 | WP_001015125.1 | shikimate kinase | - |
| RK78_RS11155 (RK78_011155) | - | 2218868..2219014 (-) | 147 | WP_001789879.1 | hypothetical protein | - |
| RK78_RS11160 (RK78_011160) | comGF | 2219111..2219608 (-) | 498 | WP_001799534.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| RK78_RS11165 (RK78_011165) | comGE | 2219526..2219825 (-) | 300 | WP_000844413.1 | hypothetical protein | Machinery gene |
| RK78_RS11170 (RK78_011170) | comGD | 2219812..2220258 (-) | 447 | WP_001791207.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| RK78_RS11175 (RK78_011175) | comGC | 2220236..2220547 (-) | 312 | WP_000472257.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| RK78_RS11180 (RK78_011180) | comGB | 2220561..2221631 (-) | 1071 | WP_000776412.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| RK78_RS11185 (RK78_011185) | comGA | 2221603..2222577 (-) | 975 | WP_000697220.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| RK78_RS11190 (RK78_011190) | - | 2222629..2223252 (-) | 624 | WP_001223008.1 | MBL fold metallo-hydrolase | - |
| RK78_RS11195 (RK78_011195) | - | 2223249..2223578 (-) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| RK78_RS11200 (RK78_011200) | - | 2223578..2224564 (-) | 987 | WP_000161314.1 | ROK family glucokinase | - |
| RK78_RS11205 (RK78_011205) | - | 2224561..2224764 (-) | 204 | WP_000087561.1 | YqgQ family protein | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11093.20 Da Isoelectric Point: 9.9215
>NTDB_id=266353 RK78_RS11165 WP_000844413.1 2219526..2219825(-) (comGE) [Staphylococcus aureus strain FDAARGOS_20]
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
Nucleotide
Download Length: 300 bp
>NTDB_id=266353 RK78_RS11165 WP_000844413.1 2219526..2219825(-) (comGE) [Staphylococcus aureus strain FDAARGOS_20]
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTTATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAATATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTTATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAATATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Staphylococcus aureus MW2 |
86.842 |
100 |
1 |
| comGE | Staphylococcus aureus N315 |
98.99 |
100 |
0.99 |