Detailed information
Bioinformatically predicted
Overview
| Name | comX/sigX | Type | Regulator |
| Locus tag | CRH08_RS00425 | Genome accession | NZ_CP025419 |
| Coordinates | 72476..72742 (+) | Length | 88 a.a. |
| NCBI ID | WP_002939335.1 | Uniprot ID | A0A126UJ45 |
| Organism | Streptococcus suis strain SH0104 | ||
| Function | activate transcription of late competence genes (predicted from homology) Competence regulation |
||
Genomic Context
Location: 67476..77742
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CRH08_RS00395 | recA | 68665..69816 (+) | 1152 | WP_011922545.1 | recombinase RecA | Machinery gene |
| CRH08_RS00400 | spx | 70052..70450 (+) | 399 | WP_002939362.1 | transcriptional regulator Spx | - |
| CRH08_RS00405 | - | 70550..70816 (+) | 267 | WP_002939360.1 | IreB family regulatory phosphoprotein | - |
| CRH08_RS00410 | ruvX | 70816..71235 (+) | 420 | WP_002939356.1 | Holliday junction resolvase RuvX | - |
| CRH08_RS00415 | - | 71247..71567 (+) | 321 | WP_002939343.1 | DUF1292 domain-containing protein | - |
| CRH08_RS00420 | - | 71825..72403 (+) | 579 | WP_044667815.1 | nucleotidyltransferase family protein | - |
| CRH08_RS00425 | comX/sigX | 72476..72742 (+) | 267 | WP_002939335.1 | hypothetical protein | Regulator |
| CRH08_RS00430 | rpsJ | 73064..73372 (+) | 309 | WP_013730061.1 | 30S ribosomal protein S10 | - |
| CRH08_RS00435 | rplC | 73585..74211 (+) | 627 | WP_011921686.1 | 50S ribosomal protein L3 | - |
| CRH08_RS00440 | rplD | 74236..74859 (+) | 624 | WP_004195490.1 | 50S ribosomal protein L4 | - |
| CRH08_RS00445 | - | 74859..75158 (+) | 300 | WP_004195491.1 | 50S ribosomal protein L23 | - |
| CRH08_RS00450 | rplB | 75176..76009 (+) | 834 | WP_002936663.1 | 50S ribosomal protein L2 | - |
| CRH08_RS00455 | rpsS | 76111..76392 (+) | 282 | WP_000533766.1 | 30S ribosomal protein S19 | - |
| CRH08_RS00460 | rplV | 76410..76754 (+) | 345 | WP_024409292.1 | 50S ribosomal protein L22 | - |
| CRH08_RS00465 | rpsC | 76767..77420 (+) | 654 | WP_002936661.1 | 30S ribosomal protein S3 | - |
Sequence
Protein
Download Length: 88 a.a. Molecular weight: 10717.52 Da Isoelectric Point: 9.1949
>NTDB_id=261090 CRH08_RS00425 WP_002939335.1 72476..72742(+) (comX/sigX) [Streptococcus suis strain SH0104]
MEFETVCLKVRNLGRLYCYFKVKFRNHIEAIIRKQESQKCKFDRLFHEDIHSLIQSPSLGNDELLMLWGLLRDYRKNLIN
DRLENMKN
MEFETVCLKVRNLGRLYCYFKVKFRNHIEAIIRKQESQKCKFDRLFHEDIHSLIQSPSLGNDELLMLWGLLRDYRKNLIN
DRLENMKN
Nucleotide
Download Length: 267 bp
>NTDB_id=261090 CRH08_RS00425 WP_002939335.1 72476..72742(+) (comX/sigX) [Streptococcus suis strain SH0104]
ATGGAATTTGAAACGGTTTGTTTGAAGGTTAGAAACTTAGGTAGGCTATATTGCTACTTCAAAGTTAAATTTAGAAACCA
TATCGAGGCTATAATTCGTAAACAGGAAAGTCAAAAATGTAAATTTGATCGTCTCTTCCATGAAGATATTCATAGTTTGA
TTCAATCACCGAGCTTGGGTAATGATGAGTTGCTGATGTTATGGGGTCTCCTGAGAGATTATCGAAAAAATTTAATCAAT
GACCGACTTGAAAATATGAAAAATTGA
ATGGAATTTGAAACGGTTTGTTTGAAGGTTAGAAACTTAGGTAGGCTATATTGCTACTTCAAAGTTAAATTTAGAAACCA
TATCGAGGCTATAATTCGTAAACAGGAAAGTCAAAAATGTAAATTTGATCGTCTCTTCCATGAAGATATTCATAGTTTGA
TTCAATCACCGAGCTTGGGTAATGATGAGTTGCTGATGTTATGGGGTCTCCTGAGAGATTATCGAAAAAATTTAATCAAT
GACCGACTTGAAAATATGAAAAATTGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comX/sigX | Streptococcus suis D9 |
73.973 |
82.955 |
0.614 |
| comX/sigX | Streptococcus suis isolate S10 |
72.603 |
82.955 |
0.602 |
| comX/sigX | Streptococcus suis P1/7 |
72.603 |
82.955 |
0.602 |
| comX/sigX/comX1/sigX1 | Streptococcus mitis NCTC 12261 |
39.506 |
92.045 |
0.364 |
| comX/sigX/comX2/sigX2 | Streptococcus mitis NCTC 12261 |
39.506 |
92.045 |
0.364 |