Detailed information NTG0259647

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: CV094_RS01665
• Genome accession: NZ_CP025266
• Coordinates: 355000..355701 (-)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii isolate SMC_Paed_Ab_BL01
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 350000..360701

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CV094_RS01635 (CV094_01635)	-	350306..350749 (-)	444	WP_001246675.1	SRPBCC family protein	-
CV094_RS01640 (CV094_01640)	tadA	350819..351322 (-)	504	WP_000033178.1	tRNA adenosine(34) deaminase TadA	-
CV094_RS01645 (CV094_01645)	-	351329..352453 (-)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
CV094_RS01650 (CV094_01650)	ung	352450..353163 (-)	714	WP_001177528.1	uracil-DNA glycosylase	-
CV094_RS01655 (CV094_01655)	-	353214..353810 (-)	597	WP_000908452.1	6-pyruvoyl trahydropterin synthase family protein	-
CV094_RS01660 (CV094_01660)	gspK	354041..355000 (-)	960	WP_000301476.1	type II secretion system minor pseudopilin GspK	-
CV094_RS01665 (CV094_01665)	xcpW	355000..355701 (-)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
CV094_RS01670 (CV094_01670)	xcpV	355701..356081 (-)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
CV094_RS01675 (CV094_01675)	-	356071..356625 (-)	555	WP_000841373.1	type II secretion system protein	-
CV094_RS01680 (CV094_01680)	-	356635..357243 (-)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
CV094_RS01685 (CV094_01685)	-	357281..358054 (-)	774	WP_000497298.1	TatD family hydrolase	-
CV094_RS01690 (CV094_01690)	-	358072..358413 (-)	342	WP_001183024.1	PilZ domain-containing protein	-
CV094_RS01695 (CV094_01695)	-	358425..359405 (-)	981	WP_001075411.1	DNA polymerase III subunit delta'	-
CV094_RS01700 (CV094_01700)	kdsB	359417..360178 (-)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=259647 CV094_RS01665 WP_000594589.1 355000..355701(-) (xcpW) [Acinetobacter baumannii isolate SMC_Paed_Ab_BL01]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=259647 CV094_RS01665 WP_000594589.1 355000..355701(-) (xcpW) [Acinetobacter baumannii isolate SMC_Paed_Ab_BL01]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996