Detailed information    

insolico Bioinformatically predicted

Overview


Name   proC   Type   Machinery gene
Locus tag   A6J91_RS02750 Genome accession   NZ_CP022077
Coordinates   548738..549469 (-) Length   243 a.a.
NCBI ID   WP_002858388.1    Uniprot ID   -
Organism   Campylobacter jejuni strain FDAARGOS_263     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 543738..554469
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A6J91_RS02710 (A6J91_02710) - 543852..544613 (+) 762 WP_002852748.1 ATP-binding protein -
  A6J91_RS02715 (A6J91_02715) - 544610..545296 (+) 687 WP_002858132.1 endonuclease III domain-containing protein -
  A6J91_RS02720 (A6J91_02720) thiD 545293..546105 (+) 813 WP_002858043.1 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase -
  A6J91_RS02725 (A6J91_02725) thiE 546095..546727 (+) 633 WP_002858441.1 thiamine phosphate synthase -
  A6J91_RS02730 (A6J91_02730) hemD 546705..547334 (+) 630 WP_002858312.1 uroporphyrinogen-III synthase -
  A6J91_RS02735 (A6J91_02735) - 547331..547783 (-) 453 WP_002859148.1 hypothetical protein -
  A6J91_RS02740 (A6J91_02740) - 547780..548442 (-) 663 WP_002858296.1 hypothetical protein -
  A6J91_RS02745 (A6J91_02745) ctsT 548439..548741 (-) 303 WP_002853046.1 type II secretion system protein Machinery gene
  A6J91_RS02750 (A6J91_02750) proC 548738..549469 (-) 732 WP_002858388.1 pyrroline-5-carboxylate reductase Machinery gene
  A6J91_RS02755 (A6J91_02755) fliW 549469..549858 (-) 390 WP_002852982.1 flagellar assembly protein FliW -
  A6J91_RS02760 (A6J91_02760) - 550019..550666 (+) 648 WP_002852961.1 outer membrane protein assembly factor BamD -
  A6J91_RS02765 (A6J91_02765) lon 550683..553058 (+) 2376 WP_002868636.1 endopeptidase La -
  A6J91_RS02770 (A6J91_02770) rpsR 553119..553379 (-) 261 WP_002853032.1 30S ribosomal protein S18 -
  A6J91_RS02775 (A6J91_02775) ssb 553390..553941 (-) 552 WP_002865738.1 single-stranded DNA-binding protein -
  A6J91_RS02780 (A6J91_02780) rpsF 553950..554327 (-) 378 WP_002865739.1 30S ribosomal protein S6 -

Sequence


Protein


Download         Length: 243 a.a.        Molecular weight: 26586.98 Da        Isoelectric Point: 8.5934

>NTDB_id=236467 A6J91_RS02750 WP_002858388.1 548738..549469(-) (proC) [Campylobacter jejuni strain FDAARGOS_263]
MLYILANGSMATALAYGLKDDYEICIVGRSIEKLQALAKEGFKTLLYKDFNIEGKDVILAFKPYALENIAQMLKGQARIL
ISVLANVDFEKLQTIKAQNYVRIIPNTAAKYKASTTPYILKNSHFENEILDILKTFGSAYKLDNEIQMNAAMAISGCAPA
FLALIAESIANAGVYEGLSKELSLNLTRSLFKSSNALLEHEHPAIIKENICSPGGVTIKGIKILEQKGIRGSFFEAINAS
SAK

Nucleotide


Download         Length: 732 bp        

>NTDB_id=236467 A6J91_RS02750 WP_002858388.1 548738..549469(-) (proC) [Campylobacter jejuni strain FDAARGOS_263]
ATGCTCTATATACTTGCAAATGGATCTATGGCAACAGCCTTAGCCTATGGGTTAAAAGATGATTATGAAATTTGTATAGT
AGGAAGAAGTATAGAAAAACTTCAAGCCCTCGCCAAAGAAGGCTTTAAAACCTTACTTTACAAAGATTTTAACATAGAAG
GTAAAGATGTTATTTTAGCATTTAAACCTTATGCTTTAGAAAATATTGCTCAAATGCTAAAAGGACAAGCACGTATCTTA
ATCTCTGTTTTAGCCAATGTTGATTTTGAAAAACTACAAACCATCAAAGCTCAAAATTATGTTAGAATAATACCCAATAC
AGCAGCTAAATACAAGGCTTCAACCACACCATATATACTTAAAAACTCTCATTTTGAAAATGAAATTTTAGACATTTTAA
AAACTTTTGGCTCGGCTTATAAATTAGATAATGAAATACAAATGAATGCAGCTATGGCGATTAGCGGCTGCGCTCCTGCT
TTTTTAGCACTTATAGCAGAAAGCATTGCTAATGCTGGAGTTTATGAAGGTTTGTCAAAAGAACTTAGTCTCAATCTTAC
GCGCTCTTTATTTAAAAGCTCTAATGCTTTACTAGAACATGAACATCCAGCTATTATCAAAGAAAATATTTGCTCCCCTG
GCGGAGTTACAATAAAAGGCATAAAAATACTCGAACAAAAAGGAATTCGCGGAAGTTTTTTTGAAGCCATAAATGCTAGC
AGCGCTAAATGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  proC Campylobacter jejuni subsp. jejuni 81-176

99.177

100

0.992


Multiple sequence alignment