Detailed information
Bioinformatically predicted
Overview
| Name | nucA/comI | Type | Machinery gene |
| Locus tag | CAH07_RS19450 | Genome accession | NZ_CP021123 |
| Coordinates | 3748749..3749198 (+) | Length | 149 a.a. |
| NCBI ID | WP_003246436.1 | Uniprot ID | A0AAE2SFQ0 |
| Organism | Bacillus subtilis strain SEM-9 | ||
| Function | cleavage of dsDNA into ssDNA (predicted from homology) DNA processing |
||
Genomic Context
Location: 3743749..3754198
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CAH07_RS19430 (CAH07_19245) | hxlR | 3744959..3745321 (-) | 363 | WP_003246265.1 | transcriptional activator HxlR | - |
| CAH07_RS19435 (CAH07_19250) | hxlA | 3745554..3746186 (+) | 633 | WP_003246452.1 | 3-hexulose-6-phosphate synthase | - |
| CAH07_RS19440 (CAH07_19255) | hxlB | 3746192..3746749 (+) | 558 | WP_003246343.1 | 6-phospho-3-hexuloisomerase | - |
| CAH07_RS19445 (CAH07_19260) | tlpC | 3746860..3748581 (+) | 1722 | WP_003246498.1 | methyl-accepting chemotaxis protein TlpC | - |
| CAH07_RS19450 (CAH07_19265) | nucA/comI | 3748749..3749198 (+) | 450 | WP_003246436.1 | DNA-entry nuclease | Machinery gene |
| CAH07_RS19455 (CAH07_19270) | nin/comJ | 3749225..3749623 (+) | 399 | WP_003246342.1 | DNA-entry nuclease inhibitor | Regulator |
| CAH07_RS19460 (CAH07_19275) | bglC | 3749660..3751093 (-) | 1434 | WP_003246242.1 | 6-phospho-beta-glucosidase | - |
| CAH07_RS19465 (CAH07_19280) | yckD | 3751247..3751579 (-) | 333 | WP_003246247.1 | YckD family protein | - |
| CAH07_RS19470 (CAH07_19285) | - | 3751661..3751975 (-) | 315 | Protein_3805 | RDD family protein | - |
| CAH07_RS19475 | - | 3752015..3752211 (-) | 197 | Protein_3806 | hypothetical protein | - |
| CAH07_RS19480 (CAH07_19290) | yckB | 3752373..3753236 (+) | 864 | WP_009966510.1 | transporter substrate-binding domain-containing protein | - |
| CAH07_RS19485 (CAH07_19295) | yckA | 3753246..3753926 (+) | 681 | WP_024572176.1 | amino acid ABC transporter permease | - |
Sequence
Protein
Download Length: 149 a.a. Molecular weight: 16486.48 Da Isoelectric Point: 4.6274
>NTDB_id=228426 CAH07_RS19450 WP_003246436.1 3748749..3749198(+) (nucA/comI) [Bacillus subtilis strain SEM-9]
MNITTDIIKTILLVIVIIAAAAVGLIKGDFFSADQKTSQTKEYDETMAFPSDRYPETAKHIKDAINEGHSEVCTIDRDGA
EERREQSLKDVPSKKGYDRDEWPMAMCKEGGEGASVEYISPADNRGAGSWVGHRLTDYPDGTKVLFTIQ
MNITTDIIKTILLVIVIIAAAAVGLIKGDFFSADQKTSQTKEYDETMAFPSDRYPETAKHIKDAINEGHSEVCTIDRDGA
EERREQSLKDVPSKKGYDRDEWPMAMCKEGGEGASVEYISPADNRGAGSWVGHRLTDYPDGTKVLFTIQ
Nucleotide
Download Length: 450 bp
>NTDB_id=228426 CAH07_RS19450 WP_003246436.1 3748749..3749198(+) (nucA/comI) [Bacillus subtilis strain SEM-9]
GTGAACATCACGACGGACATCATAAAAACGATACTTCTCGTCATCGTCATCATAGCAGCTGCAGCTGTCGGCCTGATAAA
AGGAGACTTTTTCTCAGCTGATCAAAAAACGTCTCAAACGAAAGAATATGATGAAACAATGGCCTTCCCATCTGACCGGT
ATCCCGAAACTGCCAAGCATATTAAGGATGCGATAAATGAGGGGCACTCAGAGGTGTGCACTATTGACAGAGACGGAGCT
GAAGAACGCCGCGAGCAATCATTAAAGGACGTACCTTCCAAAAAGGGGTATGACAGAGATGAATGGCCAATGGCCATGTG
CAAAGAAGGCGGTGAGGGAGCTTCTGTAGAATACATTTCTCCCGCTGACAACCGCGGAGCAGGCTCTTGGGTCGGGCATC
GGCTTACCGATTACCCAGACGGCACAAAGGTTTTATTCACAATTCAGTAA
GTGAACATCACGACGGACATCATAAAAACGATACTTCTCGTCATCGTCATCATAGCAGCTGCAGCTGTCGGCCTGATAAA
AGGAGACTTTTTCTCAGCTGATCAAAAAACGTCTCAAACGAAAGAATATGATGAAACAATGGCCTTCCCATCTGACCGGT
ATCCCGAAACTGCCAAGCATATTAAGGATGCGATAAATGAGGGGCACTCAGAGGTGTGCACTATTGACAGAGACGGAGCT
GAAGAACGCCGCGAGCAATCATTAAAGGACGTACCTTCCAAAAAGGGGTATGACAGAGATGAATGGCCAATGGCCATGTG
CAAAGAAGGCGGTGAGGGAGCTTCTGTAGAATACATTTCTCCCGCTGACAACCGCGGAGCAGGCTCTTGGGTCGGGCATC
GGCTTACCGATTACCCAGACGGCACAAAGGTTTTATTCACAATTCAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| nucA/comI | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |