Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | B7L39_RS04275 | Genome accession | NZ_CP020592 |
| Coordinates | 864610..864990 (+) | Length | 126 a.a. |
| NCBI ID | WP_000836911.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii strain USA2 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 859610..869990
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| B7L39_RS04245 (B7L39_04245) | kdsB | 860513..861274 (+) | 762 | WP_000680697.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
| B7L39_RS04250 (B7L39_04250) | - | 861286..862266 (+) | 981 | WP_001075411.1 | DNA polymerase III subunit delta' | - |
| B7L39_RS04255 (B7L39_04255) | - | 862278..862619 (+) | 342 | WP_001183024.1 | PilZ domain-containing protein | - |
| B7L39_RS04260 (B7L39_04260) | - | 862637..863410 (+) | 774 | WP_000497298.1 | TatD family hydrolase | - |
| B7L39_RS04265 (B7L39_04265) | - | 863448..864056 (+) | 609 | WP_000375838.1 | TetR/AcrR family transcriptional regulator | - |
| B7L39_RS04270 (B7L39_04270) | - | 864066..864620 (+) | 555 | WP_000841373.1 | type II secretion system protein | - |
| B7L39_RS04275 (B7L39_04275) | xcpV | 864610..864990 (+) | 381 | WP_000836911.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| B7L39_RS04280 (B7L39_04280) | gspJ | 864990..865691 (+) | 702 | Protein_846 | type II secretion system minor pseudopilin GspJ | - |
| B7L39_RS04285 (B7L39_04285) | gspK | 865691..866650 (+) | 960 | WP_000301476.1 | type II secretion system minor pseudopilin GspK | - |
| B7L39_RS04290 (B7L39_04290) | - | 866881..867477 (+) | 597 | WP_000908452.1 | 6-pyruvoyl trahydropterin synthase family protein | - |
| B7L39_RS04295 (B7L39_04295) | ung | 867528..868241 (+) | 714 | WP_001177528.1 | uracil-DNA glycosylase | - |
| B7L39_RS04300 (B7L39_04300) | - | 868238..869362 (+) | 1125 | WP_001983908.1 | enoyl-CoA hydratase/isomerase family protein | - |
| B7L39_RS04305 (B7L39_04305) | tadA | 869369..869872 (+) | 504 | WP_000033178.1 | tRNA adenosine(34) deaminase TadA | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13975.20 Da Isoelectric Point: 9.8004
>NTDB_id=224682 B7L39_RS04275 WP_000836911.1 864610..864990(+) (xcpV) [Acinetobacter baumannii strain USA2]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=224682 B7L39_RS04275 WP_000836911.1 864610..864990(+) (xcpV) [Acinetobacter baumannii strain USA2]
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
100 |
100 |
1 |