Detailed information NTG0222928

Bioinformatically predicted

Overview

• Name: amiF
• Type: Regulator
• Locus tag: A6J68_RS02070
• Genome accession: NZ_CP020432
• Coordinates: 363293..364225 (+)
• Length: 310 a.a.
• NCBI ID: WP_105253156.1
• Uniprot ID: -
• Organism: Streptococcus sp. 'group B' strain FDAARGOS_229
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 358293..369225

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
A6J68_RS02050 (A6J68_02050)	-	358506..360164 (+)	1659	WP_001118750.1	peptide ABC transporter substrate-binding protein	-
A6J68_RS02055 (A6J68_02055)	-	360279..361193 (+)	915	WP_000598967.1	ABC transporter permease	-
A6J68_RS02060 (A6J68_02060)	-	361203..362234 (+)	1032	WP_000764053.1	ABC transporter permease	-
A6J68_RS02065 (A6J68_02065)	oppD	362247..363296 (+)	1050	WP_000410289.1	ABC transporter ATP-binding protein	Regulator
A6J68_RS02070 (A6J68_02070)	amiF	363293..364225 (+)	933	WP_105253156.1	ABC transporter ATP-binding protein	Regulator

Sequence

Protein

• Length: 310 a.a.
• Molecular weight: 34869.74 Da
• Isoelectric Point: 6.8964

>NTDB_id=222928 A6J68_RS02070 WP_105253156.1 363293..364225(+) (amiF) [Streptococcus sp. 'group B' strain FDAARGOS_229]
MTENRKKIVEVKNVSLTFNKGKANEVRAIDNVSFDIYEGEVFGLVGESGSGKTTVGRSILKLYDISDGEITFNGEVISHL
KGKALHSFRKDAQMIFQDPQASLNGRMKIRDIVAEGLDIHKLAKSKSDRDSKVQALLDLVGLNKDHLTRYPHEFSGGQRQ
RIGIARALAVEPKFIIADEPISALDVSIQAQVVNLMQKLQREQGLTYLFIAHDLSMVKYISDRIGVMHWGKLLEVGTSDD
VYNKPIHPYTKSLLSAIPEPDPESERQRVHQPYNPAIEQDGQERQMHEITPGHFVLSTPQEAEEYKKQIL

Nucleotide

• Length: 933 bp

>NTDB_id=222928 A6J68_RS02070 WP_105253156.1 363293..364225(+) (amiF) [Streptococcus sp. 'group B' strain FDAARGOS_229]
ATGACTGAAAATCGAAAAAAAATAGTTGAAGTCAAAAATGTTTCTTTGACCTTCAATAAAGGAAAAGCTAATGAAGTGAG
AGCAATTGATAATGTTAGTTTTGACATTTATGAAGGTGAAGTGTTTGGATTAGTTGGGGAATCTGGATCAGGAAAGACAA
CCGTTGGACGTTCAATTTTAAAACTTTATGATATTTCTGATGGCGAAATTACCTTTAATGGAGAAGTGATCTCACATCTG
AAAGGTAAAGCATTACATAGTTTTCGTAAAGACGCTCAGATGATTTTTCAGGATCCTCAGGCTAGCTTAAACGGCCGTAT
GAAGATTCGTGATATCGTAGCAGAAGGTTTAGACATACATAAATTAGCTAAATCAAAATCAGATCGTGATAGTAAAGTTC
AGGCCCTATTAGATCTTGTAGGGTTAAATAAAGATCATTTAACACGTTATCCGCATGAATTTTCAGGTGGACAACGACAA
CGTATCGGGATTGCACGTGCTTTAGCAGTAGAGCCTAAATTTATCATTGCTGATGAACCAATATCTGCCTTAGATGTTTC
AATCCAAGCACAAGTTGTTAATTTAATGCAAAAATTGCAAAGAGAACAAGGATTGACTTATTTGTTTATCGCACATGATT
TGTCTATGGTAAAATACATTTCAGATCGTATCGGTGTTATGCATTGGGGGAAACTGTTAGAAGTTGGAACATCTGATGAT
GTTTATAACAAACCAATCCACCCTTATACGAAGAGTCTATTATCAGCTATTCCAGAACCAGATCCGGAGAGTGAACGTCA
ACGTGTTCACCAGCCGTATAATCCAGCTATTGAGCAAGACGGACAAGAACGTCAAATGCACGAGATTACACCTGGTCATT
TTGTTTTATCTACACCCCAAGAAGCTGAAGAATATAAAAAACAAATATTATAA

Domains

Predicted by InterproScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-267)

• ABC transporter (ABC_tran) (30-181)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiF	Streptococcus thermophilus LMD-9	53.896	99.355	0.535
amiF	Streptococcus thermophilus LMG 18311	53.571	99.355	0.532
amiF	Streptococcus salivarius strain HSISS4	53.77	98.387	0.529