Detailed information
Bioinformatically predicted
Overview
| Name | comQ | Type | Machinery gene |
| Locus tag | BV139_RS05685 | Genome accession | NZ_CP020012 |
| Coordinates | 1115729..1116016 (+) | Length | 95 a.a. |
| NCBI ID | WP_005655928.1 | Uniprot ID | A0A0H3PGC3 |
| Organism | Haemophilus influenzae strain 6P24H2 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1110729..1121016
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BV139_RS05660 (BV139_1147) | nrfE | 1110791..1112698 (-) | 1908 | WP_005659178.1 | heme lyase NrfEFG subunit NrfE | - |
| BV139_RS05665 (BV139_1148) | suhB | 1112807..1113610 (-) | 804 | WP_005659182.1 | inositol-1-monophosphatase | - |
| BV139_RS05670 (BV139_1149) | comN | 1113810..1114322 (+) | 513 | WP_005651545.1 | Tfp pilus assembly protein FimT/FimU | Machinery gene |
| BV139_RS05675 (BV139_1150) | comO | 1114322..1115038 (+) | 717 | WP_005655922.1 | type II secretion system protein J | Machinery gene |
| BV139_RS05680 (BV139_1151) | comP | 1115053..1115736 (+) | 684 | WP_005659188.1 | DUF2572 family protein | Machinery gene |
| BV139_RS05685 (BV139_1152) | comQ | 1115729..1116016 (+) | 288 | WP_005655928.1 | DUF5374 domain-containing protein | Machinery gene |
| BV139_RS05690 (BV139_1153) | recC | 1116062..1119427 (+) | 3366 | WP_005686198.1 | exodeoxyribonuclease V subunit gamma | - |
| BV139_RS05695 (BV139_1154) | nrdR | 1119482..1119931 (+) | 450 | WP_005651549.1 | transcriptional regulator NrdR | - |
Sequence
Protein
Download Length: 95 a.a. Molecular weight: 11033.81 Da Isoelectric Point: 9.2205
>NTDB_id=219991 BV139_RS05685 WP_005655928.1 1115729..1116016(+) (comQ) [Haemophilus influenzae strain 6P24H2]
MNKGISFITLLFSLTLFSVLFLVFNQWTASQRKSAVKTYQDFQAIQIAENQAQRQFLGLACEQLIQQNGLTFRIQCENER
IIVRYPTSEILIKTQ
MNKGISFITLLFSLTLFSVLFLVFNQWTASQRKSAVKTYQDFQAIQIAENQAQRQFLGLACEQLIQQNGLTFRIQCENER
IIVRYPTSEILIKTQ
Nucleotide
Download Length: 288 bp
>NTDB_id=219991 BV139_RS05685 WP_005655928.1 1115729..1116016(+) (comQ) [Haemophilus influenzae strain 6P24H2]
ATGAATAAAGGAATATCTTTTATTACATTGTTATTTTCTTTAACTTTATTTAGCGTTTTATTTCTTGTTTTTAATCAATG
GACGGCAAGCCAAAGAAAAAGTGCGGTGAAAACTTATCAAGATTTTCAGGCAATACAGATTGCGGAGAATCAAGCTCAAC
GCCAATTTTTAGGGTTAGCTTGTGAACAATTGATACAACAAAATGGCTTAACTTTTCGTATTCAATGTGAAAATGAACGT
ATTATTGTGCGTTATCCTACGAGTGAAATTTTGATAAAAACTCAGTAA
ATGAATAAAGGAATATCTTTTATTACATTGTTATTTTCTTTAACTTTATTTAGCGTTTTATTTCTTGTTTTTAATCAATG
GACGGCAAGCCAAAGAAAAAGTGCGGTGAAAACTTATCAAGATTTTCAGGCAATACAGATTGCGGAGAATCAAGCTCAAC
GCCAATTTTTAGGGTTAGCTTGTGAACAATTGATACAACAAAATGGCTTAACTTTTCGTATTCAATGTGAAAATGAACGT
ATTATTGTGCGTTATCCTACGAGTGAAATTTTGATAAAAACTCAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comQ | Haemophilus influenzae Rd KW20 |
95.789 |
100 |
0.958 |