Detailed information
Bioinformatically predicted
Overview
| Name | comB | Type | Machinery gene |
| Locus tag | BV131_RS02480 | Genome accession | NZ_CP020010 |
| Coordinates | 500221..500727 (-) | Length | 168 a.a. |
| NCBI ID | WP_005649305.1 | Uniprot ID | - |
| Organism | Haemophilus influenzae strain 67P38H1 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 495221..505727
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BV131_RS02450 (BV131_506) | nudC | 495714..496508 (-) | 795 | WP_014550416.1 | NAD(+) diphosphatase | - |
| BV131_RS02455 (BV131_507) | nfuA | 496575..497171 (-) | 597 | WP_005656459.1 | Fe-S biogenesis protein NfuA | - |
| BV131_RS02460 (BV131_508) | - | 497247..497933 (-) | 687 | WP_050822809.1 | ComF family protein | - |
| BV131_RS02465 (BV131_509) | comE | 497946..499283 (-) | 1338 | WP_005686897.1 | type IV pilus secretin PilQ family protein | Machinery gene |
| BV131_RS02470 (BV131_510) | comD | 499293..499706 (-) | 414 | WP_005686898.1 | pilus assembly protein PilP | Machinery gene |
| BV131_RS02475 (BV131_511) | comC | 499703..500224 (-) | 522 | WP_005686899.1 | competence protein ComC | Machinery gene |
| BV131_RS02480 (BV131_512) | comB | 500221..500727 (-) | 507 | WP_005649305.1 | competence protein ComB | Machinery gene |
| BV131_RS02485 (BV131_513) | comA | 500728..501525 (-) | 798 | WP_005686900.1 | pilus assembly protein PilM | Machinery gene |
| BV131_RS02490 (BV131_514) | - | 501624..504218 (+) | 2595 | WP_050822811.1 | penicillin-binding protein 1A | - |
| BV131_RS02495 (BV131_515) | - | 504294..505139 (+) | 846 | WP_005686902.1 | 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ | - |
| BV131_RS02500 (BV131_516) | - | 505292..505621 (+) | 330 | WP_005629464.1 | YbaB/EbfC family nucleoid-associated protein | - |
Sequence
Protein
Download Length: 168 a.a. Molecular weight: 19724.61 Da Isoelectric Point: 8.5473
>NTDB_id=219903 BV131_RS02480 WP_005649305.1 500221..500727(-) (comB) [Haemophilus influenzae strain 67P38H1]
MSMNLLPWRTYQHQKRLRRLAFYIALFILLAINLMLAFSNLIEQQKQNLQAQQKSFEQLNQQLHKTTMQIDQLRSAVKVG
EVLTSIPNEQVKKSLQQLSELPFQQGELNKFKQDANNLSLEGNAQDQTEFELIHQFLKKHFPNVKLSQVQPEQDTLFFHF
DVEQGAEK
MSMNLLPWRTYQHQKRLRRLAFYIALFILLAINLMLAFSNLIEQQKQNLQAQQKSFEQLNQQLHKTTMQIDQLRSAVKVG
EVLTSIPNEQVKKSLQQLSELPFQQGELNKFKQDANNLSLEGNAQDQTEFELIHQFLKKHFPNVKLSQVQPEQDTLFFHF
DVEQGAEK
Nucleotide
Download Length: 507 bp
>NTDB_id=219903 BV131_RS02480 WP_005649305.1 500221..500727(-) (comB) [Haemophilus influenzae strain 67P38H1]
ATGTCGATGAATTTATTGCCTTGGCGTACTTATCAACATCAAAAGCGTTTACGTCGTTTAGCTTTTTATATCGCTTTATT
TATCTTGCTTGCTATTAATTTAATGTTGGCTTTTAGCAATTTGATTGAACAACAGAAACAAAATTTGCAGGCACAGCAAA
AGTCGTTTGAACAACTTAATCAACAGCTTCATAAAACTACCATGCAAATTGATCAGTTACGCAGTGCGGTGAAAGTTGGT
GAAGTTTTGACATCTATTCCCAACGAGCAAGTAAAAAAGAGTTTACAACAGCTAAGTGAATTACCTTTTCAACAAGGAGA
ACTGAATAAATTTAAACAAGATGCCAATAACTTAAGCTTGGAAGGTAACGCACAAGATCAAACAGAATTTGAACTGATTC
ATCAATTTTTAAAGAAACATTTTCCCAATGTGAAATTAAGTCAGGTTCAACCTGAACAAGATACATTGTTTTTTCACTTT
GATGTGGAACAAGGGGCGGAAAAATGA
ATGTCGATGAATTTATTGCCTTGGCGTACTTATCAACATCAAAAGCGTTTACGTCGTTTAGCTTTTTATATCGCTTTATT
TATCTTGCTTGCTATTAATTTAATGTTGGCTTTTAGCAATTTGATTGAACAACAGAAACAAAATTTGCAGGCACAGCAAA
AGTCGTTTGAACAACTTAATCAACAGCTTCATAAAACTACCATGCAAATTGATCAGTTACGCAGTGCGGTGAAAGTTGGT
GAAGTTTTGACATCTATTCCCAACGAGCAAGTAAAAAAGAGTTTACAACAGCTAAGTGAATTACCTTTTCAACAAGGAGA
ACTGAATAAATTTAAACAAGATGCCAATAACTTAAGCTTGGAAGGTAACGCACAAGATCAAACAGAATTTGAACTGATTC
ATCAATTTTTAAAGAAACATTTTCCCAATGTGAAATTAAGTCAGGTTCAACCTGAACAAGATACATTGTTTTTTCACTTT
GATGTGGAACAAGGGGCGGAAAAATGA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comB | Haemophilus influenzae 86-028NP |
99.405 |
100 |
0.994 |
| comB | Haemophilus influenzae Rd KW20 |
99.405 |
100 |
0.994 |