Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   BKN48_RS16240 Genome accession   NZ_CP017676
Coordinates   3107350..3108006 (+) Length   218 a.a.
NCBI ID   WP_003245194.1    Uniprot ID   A0AAE2VF25
Organism   Bacillus subtilis strain VV2     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 3102350..3113006
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BKN48_RS16215 (BKN48_16215) oppF 3102606..3103523 (+) 918 WP_003239287.1 oligopeptide ABC transporter ATP-binding protein OppF -
  BKN48_RS16220 (BKN48_16220) yjbB 3103630..3104847 (+) 1218 WP_080481263.1 MFS transporter -
  BKN48_RS16225 (BKN48_16225) yjbC 3105011..3105589 (+) 579 WP_003224597.1 GNAT family N-acetyltransferase -
  BKN48_RS16230 (BKN48_16230) spx 3105770..3106165 (+) 396 WP_014476435.1 transcriptional regulator Spx -
  BKN48_RS16235 (BKN48_16235) yjbE 3106420..3107076 (-) 657 WP_003232944.1 TerC family protein -
  BKN48_RS21245 - 3107243..3107383 (+) 141 WP_119122854.1 hypothetical protein -
  BKN48_RS16240 (BKN48_16240) mecA 3107350..3108006 (+) 657 WP_003245194.1 adaptor protein MecA Regulator
  BKN48_RS21250 - 3108001..3108123 (-) 123 WP_003245684.1 hypothetical protein -
  BKN48_RS16245 (BKN48_16245) coiA 3108197..3109318 (+) 1122 WP_236824395.1 competence protein CoiA Machinery gene
  BKN48_RS16250 (BKN48_16250) pepF 3109548..3111377 (+) 1830 WP_003245178.1 oligoendopeptidase F -
  BKN48_RS16255 (BKN48_16255) - 3111415..3111582 (-) 168 WP_003244944.1 hypothetical protein -
  BKN48_RS16265 (BKN48_16265) spxH 3111897..3112796 (-) 900 WP_003245184.1 protease adaptor protein SpxH -

Sequence

Protein


Download         Length: 218 a.a.        Molecular weight: 25763.69 Da        Isoelectric Point: 4.1174

>NTDB_id=201522 BKN48_RS16240 WP_003245194.1 3107350..3108006(+) (mecA) [Bacillus subtilis strain VV2]
MEIERINEHTVKFYMSYGDIEDRGFDREEIWYNRERSEELFWEVMDEVHEEEEFAVEGPLWIQVQALDKGLEIIVTKAQL
SKDGQKLELPIPEDKKQEPASEDLDALLDDFQKEEQAVNQEEKEQKLQFVLRFGDFEDVISLSKLNVNGSKTTLYSFENR
YYLYVDFCNMTDEEVENQLSILLEYATESSISIHRLEEYGKLIISEHALETIKKHFAS

Nucleotide


Download         Length: 657 bp        

>NTDB_id=201522 BKN48_RS16240 WP_003245194.1 3107350..3108006(+) (mecA) [Bacillus subtilis strain VV2]
ATGGAAATTGAAAGAATTAACGAGCATACAGTAAAATTTTATATGTCTTACGGAGATATTGAAGATCGCGGTTTTGACAG
AGAAGAAATTTGGTATAACCGTGAGCGCAGTGAAGAACTTTTCTGGGAAGTCATGGATGAAGTTCATGAAGAAGAGGAAT
TCGCTGTGGAAGGCCCACTTTGGATTCAAGTTCAGGCACTGGACAAAGGATTAGAAATCATCGTCACAAAAGCCCAGCTT
TCCAAAGACGGACAAAAGCTCGAACTGCCGATTCCTGAGGATAAAAAGCAAGAACCAGCATCTGAGGATCTTGACGCCTT
GCTGGATGATTTCCAGAAAGAAGAGCAAGCCGTCAATCAGGAAGAGAAGGAGCAAAAGCTTCAATTTGTCTTGCGATTTG
GCGATTTTGAGGATGTTATTTCTCTATCTAAATTGAACGTTAACGGAAGCAAAACGACTTTATATTCGTTTGAGAACCGA
TATTATTTATATGTAGATTTTTGCAATATGACTGATGAAGAGGTTGAAAATCAGCTAAGCATCCTGCTGGAGTACGCAAC
TGAATCCTCAATCAGCATACACCGTCTTGAAGAGTACGGCAAGCTGATTATTTCAGAGCATGCTCTAGAAACGATAAAAA
AACACTTTGCATCATAG

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-212)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment