Detailed information NTG0197658

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: BSBS38_RS19270
• Genome accession: NZ_CP017314
• Coordinates: 3631110..3632255 (+)
• Length: 381 a.a.
• NCBI ID: WP_014481226.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain BS38
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3626110..3637255

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BSBS38_RS19245 (BSBS38_03874)	albF	3626126..3627406 (+)	1281	WP_069964371.1	M16 family metallopeptidase	-
BSBS38_RS19250 (BSBS38_03875)	albG	3627403..3628104 (+)	702	WP_014481222.1	antilisterial bacteriocin subtilosin biosynthesis protein AlbG	-
BSBS38_RS19255 (BSBS38_03876)	ywhL	3628110..3629486 (-)	1377	WP_014481223.1	YncE family protein	-
BSBS38_RS19260 (BSBS38_03877)	ywhK	3629525..3630880 (-)	1356	WP_014481224.1	YncE family protein	-
BSBS38_RS22650	-	3630877..3631107 (-)	231	Protein_3738	hypothetical protein	-
BSBS38_RS19270 (BSBS38_03878)	rapF	3631110..3632255 (+)	1146	WP_014481226.1	response regulator aspartate phosphatase RapF	Regulator
BSBS38_RS19275 (BSBS38_03879)	phrF	3632239..3632358 (+)	120	WP_009968329.1	phosphatase RapF inhibitor PhrF	Regulator
BSBS38_RS19280 (BSBS38_03880)	-	3632456..3632883 (+)	428	Protein_3741	YbaK/EbsC family protein	-
BSBS38_RS19285 (BSBS38_03881)	speB	3632948..3633820 (-)	873	WP_003227545.1	agmatinase	-
BSBS38_RS19290 (BSBS38_03882)	speE	3633881..3634711 (-)	831	WP_003227543.1	spermidine synthase	-
BSBS38_RS19295 (BSBS38_03883)	pbpG	3634914..3636989 (+)	2076	WP_015384942.1	transglycosylase domain-containing protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45627.12 Da
• Isoelectric Point: 5.1503

>NTDB_id=197658 BSBS38_RS19270 WP_014481226.1 3631110..3632255(+) (rapF) [Bacillus subtilis strain BS38]
MTGVISSSSIGEKINEWYMYIRRFSIPDAEYLRREIKQELDQMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLLEIDKKQARLTGLLEYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFS
MDYARQAYEIYKEHEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYED
AIPYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKMDKAHEYHSKGMAYSQKAGDVIYLSEFEFLKSLYLSGPDEEAI
QGFFDFLESKMLYADLEDFAIDVAKYYHERKNFQKASAYFLKVEQVRQLIQGGVSLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=197658 BSBS38_RS19270 WP_014481226.1 3631110..3632255(+) (rapF) [Bacillus subtilis strain BS38]
GTGACAGGTGTCATATCTTCTTCTTCCATCGGAGAAAAGATTAACGAATGGTATATGTACATACGCCGATTCAGCATACC
CGATGCAGAATATTTGCGACGAGAAATCAAGCAAGAGCTGGATCAAATGGAAGAAGATCAAGACCTTCATTTGTACTATT
CACTGATGGAGTTTCGGCACAACCTAATGCTTGAGTACCTTGAACCGTTAGAAAAAATGAGGATTGAGGAACAGCCGAGA
CTGTCTGATCTGCTGCTTGAGATTGATAAAAAACAGGCTCGTTTAACTGGTCTGCTTGAGTACTATTTTAACTTCTTCAG
AGGCATGTACGAGCTGGACCAGCGGGAATATCTGTCGGCTATTAAATTTTTCAAAAAGGCCGAAAGCAAGCTGATATTCG
TTAAGGATCGGATAGAGAAAGCTGAGTTTTTCTTTAAGATGTCTGAATCTTATTACTATATGAAACAAACGTATTTTTCA
ATGGACTATGCACGGCAAGCATATGAAATATACAAAGAACATGAAGCTTATAATATAAGATTGCTGCAGTGTCATTCTTT
ATTTGCCACCAATTTTTTAGATTTAAAACAGTATGAGGATGCCATCTCACATTTTCAAAAAGCTTATTCTATGGCAGAAG
CTGAAAAGCAGCCCCAATTAATGGGGAGAACTTTGTACAATATCGGGCTTTGTAAAAACAGCCAAAGCCAATATGAGGAT
GCCATACCTTATTTCAAAAGAGCAATAGCTGTTTTTGAAGAATCAAATATTCTTCCTTCCTTACCTCAAGCGTATTTTTT
AATTACACAGATCCATTATAAATTAGGAAAAATGGATAAAGCTCATGAATATCATAGTAAGGGAATGGCTTATTCACAAA
AGGCCGGAGATGTAATATATTTATCAGAGTTTGAATTTTTGAAATCTTTATACTTATCAGGCCCGGATGAAGAAGCAATT
CAAGGATTTTTTGATTTTCTCGAAAGTAAAATGTTGTATGCTGATCTTGAAGATTTCGCTATTGATGTGGCAAAATATTA
TCATGAACGTAAAAATTTTCAAAAAGCTTCTGCTTATTTTTTGAAGGTGGAACAAGTAAGGCAACTTATTCAAGGAGGAG
TGAGTTTGTATGAAATTGAAGTCTAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Tetratricopeptide repeat (TPR_12) (223-290)

• Anaphase-promoting complex, cyclosome, subunit 3 (ANAPC3) (132-208)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	99.738	100	0.997
rapC	Bacillus subtilis subsp. subtilis str. 168	57.368	99.738	0.572