Detailed information
Bioinformatically predicted
Overview
| Name | lpp1978 | Type | Machinery gene |
| Locus tag | BE842_RS05810 | Genome accession | NZ_CP016870 |
| Coordinates | 1287332..1287646 (-) | Length | 104 a.a. |
| NCBI ID | WP_011215961.1 | Uniprot ID | Q5WV44 |
| Organism | Legionella pneumophila subsp. pneumophila strain FFI103 | ||
| Function | DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1282332..1292646
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BE842_RS05785 (BE842_05785) | - | 1282758..1283258 (-) | 501 | WP_011214243.1 | hypothetical protein | - |
| BE842_RS05790 (BE842_05790) | - | 1283749..1284609 (+) | 861 | WP_011215957.1 | polysaccharide deacetylase family protein | - |
| BE842_RS05795 (BE842_05795) | - | 1284733..1285923 (-) | 1191 | WP_011215958.1 | murein transglycosylase A | - |
| BE842_RS05800 (BE842_05800) | lpp1976 | 1286033..1286590 (-) | 558 | WP_011215959.1 | hypothetical protein | Machinery gene |
| BE842_RS05805 (BE842_05805) | lpp1977 | 1286587..1287393 (-) | 807 | WP_011215960.1 | PilW family protein | Machinery gene |
| BE842_RS05810 (BE842_05810) | lpp1978 | 1287332..1287646 (-) | 315 | WP_011215961.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | Machinery gene |
| BE842_RS05815 (BE842_05815) | hisC | 1287806..1288915 (+) | 1110 | WP_011215962.1 | histidinol-phosphate transaminase | - |
| BE842_RS05820 (BE842_05820) | - | 1288952..1289293 (+) | 342 | WP_011215963.1 | 4a-hydroxytetrahydrobiopterin dehydratase | - |
| BE842_RS05825 (BE842_05825) | secF | 1289483..1290400 (-) | 918 | WP_011215964.1 | protein translocase subunit SecF | - |
| BE842_RS05830 (BE842_05830) | secD | 1290413..1292269 (-) | 1857 | WP_011215965.1 | protein translocase subunit SecD | - |
| BE842_RS05835 (BE842_05835) | yajC | 1292291..1292626 (-) | 336 | WP_010947718.1 | preprotein translocase subunit YajC | - |
Sequence
Protein
Download Length: 104 a.a. Molecular weight: 12327.37 Da Isoelectric Point: 8.4863
>NTDB_id=193090 BE842_RS05810 WP_011215961.1 1287332..1287646(-) (lpp1978) [Legionella pneumophila subsp. pneumophila strain FFI103]
MSKHQGFTLMEVLVSLMLMTTVVLMLVEQQLKTRDIINHLIWRIQGSQYLDQVDEAFYISENRLPLPPSNYHFDIRQSQK
KIILNVTWFKKSQSIIRSYELDAN
MSKHQGFTLMEVLVSLMLMTTVVLMLVEQQLKTRDIINHLIWRIQGSQYLDQVDEAFYISENRLPLPPSNYHFDIRQSQK
KIILNVTWFKKSQSIIRSYELDAN
Nucleotide
Download Length: 315 bp
>NTDB_id=193090 BE842_RS05810 WP_011215961.1 1287332..1287646(-) (lpp1978) [Legionella pneumophila subsp. pneumophila strain FFI103]
ATGAGCAAGCATCAGGGTTTCACTCTAATGGAAGTACTTGTGTCATTAATGCTAATGACAACGGTAGTTCTGATGTTAGT
GGAACAACAGTTGAAAACCAGAGATATAATCAATCATCTTATTTGGCGAATTCAAGGTTCCCAATATCTAGATCAAGTCG
ATGAAGCATTCTATATTAGTGAGAATAGACTCCCTCTGCCGCCTTCAAATTATCATTTTGATATCAGGCAATCTCAAAAG
AAAATCATTTTGAATGTTACATGGTTTAAAAAAAGCCAGTCCATTATTCGCTCCTATGAGCTGGATGCTAATTGA
ATGAGCAAGCATCAGGGTTTCACTCTAATGGAAGTACTTGTGTCATTAATGCTAATGACAACGGTAGTTCTGATGTTAGT
GGAACAACAGTTGAAAACCAGAGATATAATCAATCATCTTATTTGGCGAATTCAAGGTTCCCAATATCTAGATCAAGTCG
ATGAAGCATTCTATATTAGTGAGAATAGACTCCCTCTGCCGCCTTCAAATTATCATTTTGATATCAGGCAATCTCAAAAG
AAAATCATTTTGAATGTTACATGGTTTAAAAAAAGCCAGTCCATTATTCGCTCCTATGAGCTGGATGCTAATTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| lpp1978 | Legionella pneumophila strain ERS1305867 |
94.231 |
100 |
0.942 |
| lpp1978 | Legionella pneumophila str. Paris |
92.308 |
100 |
0.923 |