Detailed information
Bioinformatically predicted
Overview
| Name | pilE | Type | Machinery gene |
| Locus tag | A6L28_RS00015 | Genome accession | NZ_CP016645 |
| Coordinates | 2807..3253 (+) | Length | 148 a.a. |
| NCBI ID | WP_002220239.1 | Uniprot ID | A0A0Y6S569 |
| Organism | Neisseria meningitidis strain M12752 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1..8253
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A6L28_RS00005 (A6L28_00005) | katA | 254..1768 (+) | 1515 | WP_002221625.1 | catalase KatA | - |
| A6L28_RS13160 | - | 1844..1981 (+) | 138 | WP_153312121.1 | hypothetical protein | - |
| A6L28_RS14455 | - | 2267..2395 (-) | 129 | WP_256864603.1 | hypothetical protein | - |
| A6L28_RS14180 | - | 2400..2549 (+) | 150 | WP_227718351.1 | hypothetical protein | - |
| A6L28_RS00015 (A6L28_00015) | pilE | 2807..3253 (+) | 447 | WP_002220239.1 | pilin | Machinery gene |
| A6L28_RS00020 (A6L28_00020) | - | 3707..4207 (+) | 501 | WP_002220237.1 | REP-associated tyrosine transposase | - |
| A6L28_RS00025 (A6L28_00025) | - | 4671..5237 (+) | 567 | WP_002236626.1 | manganese efflux pump MntP family protein | - |
| A6L28_RS14460 | - | 5365..5496 (-) | 132 | WP_257623167.1 | hypothetical protein | - |
| A6L28_RS00030 (A6L28_00030) | - | 5513..7549 (-) | 2037 | WP_002247939.1 | M3 family metallopeptidase | - |
Sequence
Protein
Download Length: 148 a.a. Molecular weight: 15648.94 Da Isoelectric Point: 9.3582
>NTDB_id=189960 A6L28_RS00015 WP_002220239.1 2807..3253(+) (pilE) [Neisseria meningitidis strain M12752]
MKAIQKGFTLIELMIVIAIVGILAAVALPAYQDYTARAQMSEALTLAEGQKSAVVEYYSDNGTFPNSNTSAGIAASNEIK
GKYVASVKVEGNASVASITATMNSSNVNKDIKGKTLVLVGKQNSGSFSWECKKGSVDEKFLPSTCRTK
MKAIQKGFTLIELMIVIAIVGILAAVALPAYQDYTARAQMSEALTLAEGQKSAVVEYYSDNGTFPNSNTSAGIAASNEIK
GKYVASVKVEGNASVASITATMNSSNVNKDIKGKTLVLVGKQNSGSFSWECKKGSVDEKFLPSTCRTK
Nucleotide
Download Length: 447 bp
>NTDB_id=189960 A6L28_RS00015 WP_002220239.1 2807..3253(+) (pilE) [Neisseria meningitidis strain M12752]
ATGAAAGCAATCCAAAAAGGTTTCACCCTGATCGAGCTGATGATCGTCATCGCCATCGTCGGTATCTTGGCAGCCGTCGC
CCTGCCCGCATACCAAGACTACACCGCGCGCGCCCAAATGTCCGAAGCCCTGACTTTGGCAGAAGGTCAAAAATCCGCAG
TGGTCGAGTATTATTCCGACAACGGCACATTCCCGAACAGCAATACTTCCGCAGGTATTGCTGCCTCTAACGAGATTAAA
GGTAAGTATGTGGCATCGGTTAAGGTTGAAGGTAATGCCTCTGTTGCTTCTATTACCGCTACCATGAACTCTAGTAATGT
GAATAAGGACATCAAAGGTAAAACCTTGGTACTCGTCGGCAAACAAAACTCCGGCTCGTTCTCTTGGGAATGTAAAAAAG
GTTCTGTGGACGAAAAATTCTTGCCATCTACCTGCCGCACCAAATAA
ATGAAAGCAATCCAAAAAGGTTTCACCCTGATCGAGCTGATGATCGTCATCGCCATCGTCGGTATCTTGGCAGCCGTCGC
CCTGCCCGCATACCAAGACTACACCGCGCGCGCCCAAATGTCCGAAGCCCTGACTTTGGCAGAAGGTCAAAAATCCGCAG
TGGTCGAGTATTATTCCGACAACGGCACATTCCCGAACAGCAATACTTCCGCAGGTATTGCTGCCTCTAACGAGATTAAA
GGTAAGTATGTGGCATCGGTTAAGGTTGAAGGTAATGCCTCTGTTGCTTCTATTACCGCTACCATGAACTCTAGTAATGT
GAATAAGGACATCAAAGGTAAAACCTTGGTACTCGTCGGCAAACAAAACTCCGGCTCGTTCTCTTGGGAATGTAAAAAAG
GTTCTGTGGACGAAAAATTCTTGCCATCTACCTGCCGCACCAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilE | Neisseria gonorrhoeae MS11 |
58.788 |
100 |
0.655 |
| pilE | Neisseria gonorrhoeae strain FA1090 |
56.173 |
100 |
0.615 |
| pilE | Neisseria elongata subsp. glycolytica ATCC 29315 |
39.766 |
100 |
0.459 |
| pilA | Ralstonia pseudosolanacearum GMI1000 |
38.596 |
100 |
0.446 |
| pilA/pilA1 | Eikenella corrodens VA1 |
41.026 |
100 |
0.432 |
| comP | Acinetobacter baylyi ADP1 |
42.384 |
100 |
0.432 |
| pilA2 | Legionella pneumophila str. Paris |
42.657 |
96.622 |
0.412 |
| pilA2 | Legionella pneumophila strain ERS1305867 |
41.259 |
96.622 |
0.399 |
| pilA | Pseudomonas aeruginosa PAK |
37.255 |
100 |
0.385 |
| pilA | Vibrio campbellii strain DS40M4 |
38.255 |
100 |
0.385 |
| pilA/pilAI | Pseudomonas stutzeri DSM 10701 |
36.986 |
98.649 |
0.365 |