Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   BBD27_RS03250 Genome accession   NZ_CP016394
Coordinates   623034..624296 (-) Length   420 a.a.
NCBI ID   WP_024704166.1    Uniprot ID   -
Organism   Streptococcus thermophilus strain ND07     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 618034..629296
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BBD27_RS03240 (BBD27_0653) - 618544..620484 (-) 1941 WP_024704168.1 ABC transporter substrate binding protein -
  BBD27_RS03245 (BBD27_0654) - 621101..622963 (-) 1863 WP_024704167.1 proline--tRNA ligase -
  BBD27_RS03250 (BBD27_0655) eeP 623034..624296 (-) 1263 WP_024704166.1 RIP metalloprotease RseP Regulator
  BBD27_RS03255 (BBD27_0656) - 624313..625107 (-) 795 WP_014607913.1 phosphatidate cytidylyltransferase -
  BBD27_RS03260 (BBD27_0657) - 625120..625869 (-) 750 WP_002949314.1 isoprenyl transferase -
  BBD27_RS03265 (BBD27_0658) - 625998..626336 (-) 339 WP_011225395.1 preprotein translocase subunit YajC -
  BBD27_RS03270 (BBD27_0659) - 626462..627178 (-) 717 WP_002949309.1 YebC/PmpR family DNA-binding transcriptional regulator -
  BBD27_RS03275 (BBD27_0660) - 627366..628715 (-) 1350 WP_011680683.1 glucose-6-phosphate isomerase -

Sequence


Protein


Download         Length: 420 a.a.        Molecular weight: 45620.06 Da        Isoelectric Point: 6.8829

>NTDB_id=187830 BBD27_RS03250 WP_024704166.1 623034..624296(-) (eeP) [Streptococcus thermophilus strain ND07]
MKAIITFLLIFCVIVVFHEFGHFFFAKRSGILVREFAIGMGPKIFAHTGKDGTVYTIRILPLGGYVRMAGWGEDTTEIKT
GSPASLTLGKNGKVRRINLSDRQVDQTALPMNVTAYDLEDKLTITGLVLGETKTYEVDHDATIVEEDGTELRIAPKDVQY
QNASIWGRLITNFAGPMNNFILGVLVFIILAFVQGGVQDTSTNLIQVANGGAAQVSGLKTGDAIVAINKDKVTDWDSLKE
ALRENTQKFSKGDSLSVTVKRSNGQEETISVKPQESQGSYFLGVSPVLKTGLKDKIFGGFQMAWEGATAILATLKGLITN
FSLNKLGGPVAMFQMSAQASESGLISILDLMGMLSINLGIFNLIPIPALDGGKIVMNIIEAIRRKPLNQEIESYITLAGV
AVMVVLMIAVTWNDIMRAFF

Nucleotide


Download         Length: 1263 bp        

>NTDB_id=187830 BBD27_RS03250 WP_024704166.1 623034..624296(-) (eeP) [Streptococcus thermophilus strain ND07]
ATGAAAGCTATTATTACTTTTTTACTGATTTTCTGTGTGATTGTCGTCTTCCATGAGTTTGGCCATTTCTTCTTTGCCAA
ACGATCAGGCATTCTGGTGCGTGAATTTGCCATTGGGATGGGTCCTAAAATTTTTGCACATACTGGTAAGGATGGTACCG
TTTATACTATTCGTATCCTTCCTTTGGGTGGTTATGTGCGTATGGCTGGTTGGGGTGAAGATACAACTGAGATTAAAACG
GGGAGTCCTGCTAGCCTAACGCTTGGAAAAAATGGCAAAGTGAGACGTATCAATCTTTCAGATCGTCAGGTTGACCAGAC
GGCTTTGCCTATGAACGTTACTGCCTATGATTTGGAAGATAAGTTAACTATTACTGGTCTTGTCCTAGGTGAGACCAAGA
CCTATGAGGTTGACCATGATGCCACTATCGTTGAGGAAGACGGTACGGAGCTTCGTATTGCTCCTAAGGATGTCCAATAT
CAAAATGCTAGCATTTGGGGACGTTTAATTACCAATTTCGCTGGTCCTATGAACAACTTTATTCTTGGGGTCTTGGTCTT
TATTATCCTTGCCTTTGTTCAAGGTGGTGTTCAAGATACGTCGACCAACCTTATCCAGGTGGCTAATGGTGGTGCTGCCC
AGGTGTCAGGTTTGAAAACTGGTGATGCCATCGTGGCCATTAACAAGGACAAGGTTACTGACTGGGACAGCTTGAAAGAA
GCATTGAGAGAGAATACCCAAAAATTCTCGAAAGGCGACAGCCTTTCTGTGACGGTTAAGAGAAGTAATGGTCAGGAAGA
AACTATTTCTGTTAAACCCCAAGAGAGCCAAGGAAGCTACTTTTTAGGTGTCTCTCCTGTCTTAAAGACAGGTCTTAAAG
ATAAGATTTTTGGTGGTTTCCAAATGGCTTGGGAAGGTGCGACGGCAATCCTCGCTACGCTCAAAGGGCTCATTACCAAC
TTTAGCTTGAACAAGCTTGGTGGACCGGTTGCTATGTTCCAGATGTCTGCACAAGCCTCAGAAAGTGGGTTGATTTCCAT
TCTTGACCTTATGGGAATGCTCTCTATCAACTTAGGGATTTTCAATCTTATTCCAATTCCAGCCCTTGACGGTGGTAAAA
TTGTTATGAATATTATTGAAGCTATTCGTCGTAAACCACTTAATCAAGAAATTGAAAGCTATATCACACTCGCAGGTGTT
GCGGTCATGGTTGTCCTTATGATTGCAGTAACTTGGAATGATATTATGCGTGCTTTCTTTTAA

Domains


Predicted by InterproScan.

(6-406)

(204-272)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

99.762

100

0.998

  eeP Streptococcus thermophilus LMG 18311

99.524

100

0.995


Multiple sequence alignment