Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   V471_RS02800 Genome accession   NZ_CP015283
Coordinates   542244..543011 (+) Length   255 a.a.
NCBI ID   WP_014635206.1    Uniprot ID   A0A1F2H938
Organism   Streptococcus salivarius strain ATCC 25975     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 537244..548011
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  V471_RS11365 (V471_02755) - 539559..540241 (-) 683 Protein_541 YoaK family protein -
  V471_RS02790 (V471_02760) rlmH 540257..540736 (-) 480 WP_014632473.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  V471_RS02795 (V471_02765) htrA 540942..542177 (+) 1236 WP_013991347.1 S1C family serine protease Regulator
  V471_RS02800 (V471_02770) spo0J 542244..543011 (+) 768 WP_014635206.1 ParB/RepB/Spo0J family partition protein Regulator
  V471_RS02805 (V471_02775) dnaA 543251..544615 (+) 1365 WP_049553505.1 chromosomal replication initiator protein DnaA -
  V471_RS02810 (V471_02780) dnaN 544770..545906 (+) 1137 WP_002886270.1 DNA polymerase III subunit beta -
  V471_RS02815 (V471_02785) - 545958..546149 (+) 192 WP_002886272.1 DUF951 domain-containing protein -
  V471_RS02820 (V471_02790) ychF 546359..547474 (+) 1116 WP_002883967.1 redox-regulated ATPase YchF -

Sequence

Protein


Download         Length: 255 a.a.        Molecular weight: 29363.81 Da        Isoelectric Point: 9.4081

>NTDB_id=178281 V471_RS02800 WP_014635206.1 542244..543011(+) (spo0J) [Streptococcus salivarius strain ATCC 25975]
MQEQLKALPISDIYPNPFQPRIEFSDEELAELSQSIAENGLIQPIIVRKSDIIGYELIAGERRLRACKRLGMTEIPAVVK
EVTDQESRKQAIIENLQRSNLNPIEEAKAYRSLINELAYSHEELAKAMGKSRPYISNALRLLQLPQEIQTSIENGKLSQG
HARALLAVEDTKKQLTIYHQVLTEKWSVRTLEKRLQELPKKQKSKKDIHIKDKEKELEKSLGLPVTLRYHKNHSGTIQIH
FSTEEDFNRIINKLI

Nucleotide


Download         Length: 768 bp        

>NTDB_id=178281 V471_RS02800 WP_014635206.1 542244..543011(+) (spo0J) [Streptococcus salivarius strain ATCC 25975]
ATGCAAGAACAACTCAAAGCTTTACCTATTAGTGACATCTATCCCAATCCTTTTCAACCTCGTATAGAGTTCTCTGATGA
AGAATTAGCGGAGCTAAGCCAATCGATTGCAGAAAATGGACTAATACAGCCAATCATTGTCCGAAAATCGGATATTATTG
GTTATGAACTAATTGCTGGGGAAAGACGTTTACGTGCCTGTAAACGTCTAGGAATGACAGAAATCCCTGCAGTTGTAAAG
GAAGTTACAGATCAAGAGAGTCGTAAACAAGCTATTATTGAAAATTTACAACGATCGAATCTCAATCCCATTGAAGAAGC
AAAGGCCTATCGTAGTTTAATTAATGAGCTAGCTTATAGTCACGAGGAACTGGCGAAAGCTATGGGGAAATCCAGACCCT
ATATCAGTAACGCTCTTAGACTCCTCCAACTTCCCCAAGAGATACAGACAAGTATCGAAAATGGCAAACTGAGTCAAGGA
CATGCTAGAGCACTTTTAGCTGTTGAGGATACAAAAAAGCAACTAACTATCTATCATCAGGTCCTTACTGAAAAATGGTC
TGTTCGTACCCTGGAAAAAAGACTTCAAGAACTTCCAAAAAAACAAAAATCAAAAAAAGATATTCATATAAAAGATAAAG
AAAAAGAACTTGAAAAATCACTTGGTCTCCCCGTTACTCTTCGTTATCACAAAAATCACTCTGGAACTATTCAGATCCAC
TTTTCGACAGAAGAAGATTTTAACAGAATTATCAACAAGCTTATTTGA

Domains

Predicted by InterproScan.

HTH domain found in ParB protein (HTH_ParB)

(146-196)

ParB/Sulfiredoxin domain (ParB_N)

(8-95)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1F2H938

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

57.647

100

0.576

Multiple sequence alignment