Detailed information NTG0161882

Bioinformatically predicted

Overview

• Name: pilP
• Type: Machinery gene
• Locus tag: ASZ88_RS13255
• Genome accession: NZ_CP013311
• Coordinates: 2810759..2811277 (-)
• Length: 172 a.a.
• NCBI ID: WP_000792032.1
• Uniprot ID: -
• Organism: Vibrio cholerae strain E1320
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2805759..2816277

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ASZ88_RS13240 (ASZ88_02537)	aroB	2807194..2808279 (-)	1086	WP_000439805.1	3-dehydroquinate synthase	-
ASZ88_RS13245 (ASZ88_02538)	aroK	2808307..2808831 (-)	525	WP_000818616.1	shikimate kinase AroK	-
ASZ88_RS13250 (ASZ88_02539)	pilQ	2809018..2810733 (-)	1716	WP_000788426.1	type IV pilus secretin PilQ	Machinery gene
ASZ88_RS13255 (ASZ88_02540)	pilP	2810759..2811277 (-)	519	WP_000792032.1	pilus assembly protein PilP	Machinery gene
ASZ88_RS13260 (ASZ88_02541)	pilO	2811267..2811857 (-)	591	WP_000157690.1	type 4a pilus biogenesis protein PilO	Machinery gene
ASZ88_RS13265 (ASZ88_02542)	pilN	2811850..2812434 (-)	585	WP_000902745.1	PilN domain-containing protein	Machinery gene
ASZ88_RS13270 (ASZ88_02543)	pilM	2812424..2813440 (-)	1017	WP_000520444.1	type IV pilus assembly protein PilM	Machinery gene
ASZ88_RS13275 (ASZ88_02544)	-	2813583..2816060 (+)	2478	WP_000668733.1	penicillin-binding protein 1A	-

Sequence

Protein

• Length: 172 a.a.
• Molecular weight: 19084.25 Da
• Isoelectric Point: 10.0857

>NTDB_id=161882 ASZ88_RS13255 WP_000792032.1 2810759..2811277(-) (pilP) [Vibrio cholerae strain E1320]
MKNKPLGLWLMSLLVLVGCKANQDDLTSYVAQVEREARKEVTKLKPILEFEATPYQQHKGREPFVLPKEALVQNQPLAKA
DCWQPVPRAKNGPLERYPLHQLRLKGVMSSGGSISALVQTPAGSVVKVKAGQYVGINNGKVTRVDDNYLLINETLPDGLG
CWNQRNVKLALK

Nucleotide

• Length: 519 bp

>NTDB_id=161882 ASZ88_RS13255 WP_000792032.1 2810759..2811277(-) (pilP) [Vibrio cholerae strain E1320]
ATGAAAAATAAGCCACTTGGATTATGGCTGATGAGTTTGCTGGTGTTGGTCGGGTGTAAGGCGAACCAAGATGATTTGAC
CTCATACGTCGCGCAAGTTGAGCGTGAAGCGCGCAAAGAAGTAACTAAGCTCAAACCCATTTTAGAGTTTGAAGCCACGC
CCTATCAGCAGCACAAGGGGCGTGAGCCGTTTGTCTTACCGAAAGAAGCGTTAGTGCAAAACCAACCGCTGGCCAAAGCC
GACTGTTGGCAACCCGTGCCACGTGCGAAAAATGGGCCGTTGGAGCGTTATCCATTGCACCAATTGCGCTTAAAAGGGGT
GATGAGCAGCGGGGGCAGTATCTCTGCCTTAGTGCAAACGCCGGCAGGGAGTGTGGTCAAGGTTAAGGCGGGTCAATATG
TCGGAATCAATAATGGCAAAGTCACCCGAGTCGACGACAACTATTTGTTAATTAATGAAACTTTGCCTGATGGCTTAGGG
TGTTGGAATCAGCGTAACGTCAAGCTGGCTTTAAAATAA

Domains

Predicted by InterproScan.

• Pilus assembly protein, PilP (PilP) (25-171)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilP	Vibrio cholerae strain A1552	100	100	1
pilP	Vibrio campbellii strain DS40M4	56.395	100	0.564