Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   AKO65_RS18025 Genome accession   NZ_CP012329
Coordinates   3554661..3554858 (-) Length   65 a.a.
NCBI ID   WP_008348507.1    Uniprot ID   A0A9X0FWQ1
Organism   Bacillus altitudinis strain NJ-M2     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 3549661..3559858
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AKO65_RS18000 (AKO65_18010) - 3549831..3550811 (-) 981 WP_035392443.1 ABC transporter ATP-binding protein -
  AKO65_RS18005 (AKO65_18015) - 3550982..3551776 (-) 795 WP_035700281.1 DUF2268 domain-containing protein -
  AKO65_RS18010 (AKO65_18020) fabF 3551854..3553095 (-) 1242 WP_007499040.1 beta-ketoacyl-ACP synthase II -
  AKO65_RS18015 (AKO65_18025) - 3553117..3554055 (-) 939 WP_008348504.1 beta-ketoacyl-ACP synthase III -
  AKO65_RS18020 (AKO65_18030) - 3554225..3554458 (+) 234 WP_017360173.1 hypothetical protein -
  AKO65_RS18025 (AKO65_18035) comZ 3554661..3554858 (-) 198 WP_008348507.1 ComZ family protein Regulator
  AKO65_RS18030 (AKO65_18040) med 3554870..3555835 (-) 966 WP_008348509.1 BMP family ABC transporter substrate-binding protein Regulator
  AKO65_RS18035 (AKO65_18045) - 3555926..3556501 (-) 576 WP_057079701.1 hypothetical protein -
  AKO65_RS18040 (AKO65_18050) - 3556577..3557317 (-) 741 WP_007499048.1 hypothetical protein -
  AKO65_RS18045 (AKO65_18055) - 3557530..3557724 (+) 195 WP_024720055.1 YjzD family protein -
  AKO65_RS18050 (AKO65_18060) - 3557844..3559109 (-) 1266 WP_007499050.1 MFS transporter -
  AKO65_RS18055 (AKO65_18065) - 3559279..3559458 (-) 180 WP_008348517.1 YjzC family protein -

Sequence

Protein


Download         Length: 65 a.a.        Molecular weight: 7318.37 Da        Isoelectric Point: 4.3178

>NTDB_id=153463 AKO65_RS18025 WP_008348507.1 3554661..3554858(-) (comZ) [Bacillus altitudinis strain NJ-M2]
MQHEKSMEFLQIAMKYFPQAKEELDKAGIQLDPQALQPLLSLFTSVMQEAYELGKADAASEKATE

Nucleotide


Download         Length: 198 bp        

>NTDB_id=153463 AKO65_RS18025 WP_008348507.1 3554661..3554858(-) (comZ) [Bacillus altitudinis strain NJ-M2]
ATGCAACACGAAAAATCGATGGAGTTTTTACAAATTGCGATGAAGTATTTTCCACAAGCAAAAGAAGAATTAGATAAAGC
AGGGATTCAGCTTGATCCACAAGCACTTCAGCCGCTTCTCTCTTTGTTTACATCTGTCATGCAAGAGGCATATGAGCTTG
GAAAAGCAGATGCAGCATCAGAAAAAGCCACAGAATAG

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

70.492

93.846

0.662

Multiple sequence alignment