Detailed information
Bioinformatically predicted
Overview
| Name | ctsG | Type | Machinery gene |
| Locus tag | RC28_RS06250 | Genome accession | NZ_CP010463 |
| Coordinates | 1201963..1202478 (-) | Length | 171 a.a. |
| NCBI ID | WP_002934393.1 | Uniprot ID | - |
| Organism | Campylobacter jejuni strain CJ677CC522 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1196963..1207478
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RC28_RS06235 (RC28_06230) | - | 1197393..1198793 (-) | 1401 | WP_059111178.1 | flagellin | - |
| RC28_RS06240 (RC28_06235) | - | 1198876..1200702 (-) | 1827 | WP_002934395.1 | motility associated factor glycosyltransferase family protein | - |
| RC28_RS06245 (RC28_06240) | - | 1200712..1201963 (-) | 1252 | Protein_1228 | DUF2920 family protein | - |
| RC28_RS06250 (RC28_06245) | ctsG | 1201963..1202478 (-) | 516 | WP_002934393.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | Machinery gene |
| RC28_RS06255 (RC28_06250) | tsaD | 1202479..1203486 (-) | 1008 | WP_002934392.1 | tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD | - |
| RC28_RS06260 (RC28_06255) | - | 1203483..1204877 (-) | 1395 | WP_002934391.1 | M99 family carboxypeptidase catalytic domain-containing protein | - |
| RC28_RS06265 (RC28_06260) | dxr | 1204879..1205949 (-) | 1071 | WP_002934390.1 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase | - |
| RC28_RS06270 (RC28_06265) | cdsA | 1205946..1206671 (-) | 726 | WP_002934389.1 | phosphatidate cytidylyltransferase | - |
| RC28_RS06275 (RC28_06270) | - | 1206680..1207018 (-) | 339 | WP_002855905.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 171 a.a. Molecular weight: 18706.57 Da Isoelectric Point: 6.4683
>NTDB_id=137599 RC28_RS06250 WP_002934393.1 1201963..1202478(-) (ctsG) [Campylobacter jejuni strain CJ677CC522]
MRKAFTILELVFVIVILGILAAIALPKMSSSKDEAEVSKSLNNLKTLINDISIYTLKNDHLSSIKTMSNVSGIENVDLSN
FNGVKEVNFRVGDDKECLKLVFINKADFILMGISSNEASKNAIINAANQSHEDLENIDFTSSSSNKACVILSKNENFKNL
ASKTYLLIGGM
MRKAFTILELVFVIVILGILAAIALPKMSSSKDEAEVSKSLNNLKTLINDISIYTLKNDHLSSIKTMSNVSGIENVDLSN
FNGVKEVNFRVGDDKECLKLVFINKADFILMGISSNEASKNAIINAANQSHEDLENIDFTSSSSNKACVILSKNENFKNL
ASKTYLLIGGM
Nucleotide
Download Length: 516 bp
>NTDB_id=137599 RC28_RS06250 WP_002934393.1 1201963..1202478(-) (ctsG) [Campylobacter jejuni strain CJ677CC522]
ATGAGAAAAGCTTTTACTATATTAGAACTTGTTTTTGTGATCGTTATTTTAGGAATTTTAGCTGCTATTGCTTTGCCAAA
AATGAGTTCAAGCAAGGATGAAGCTGAAGTTAGCAAGTCTTTAAATAATCTTAAAACTTTGATCAATGATATAAGCATTT
ATACTTTAAAAAATGACCATTTAAGCTCTATAAAAACGATGAGTAATGTAAGTGGGATTGAAAATGTCGATCTTAGTAAT
TTTAACGGCGTAAAAGAAGTAAATTTTCGTGTAGGTGATGATAAAGAATGCTTAAAACTTGTTTTTATAAATAAGGCTGA
TTTTATACTCATGGGAATTTCAAGCAATGAGGCAAGTAAAAATGCTATCATCAACGCAGCCAATCAAAGCCATGAAGATT
TAGAAAATATAGACTTTACAAGCTCTTCTAGCAATAAAGCTTGCGTGATCTTAAGCAAGAATGAAAATTTTAAAAATCTA
GCGAGTAAAACTTATCTTTTAATAGGGGGAATGTAA
ATGAGAAAAGCTTTTACTATATTAGAACTTGTTTTTGTGATCGTTATTTTAGGAATTTTAGCTGCTATTGCTTTGCCAAA
AATGAGTTCAAGCAAGGATGAAGCTGAAGTTAGCAAGTCTTTAAATAATCTTAAAACTTTGATCAATGATATAAGCATTT
ATACTTTAAAAAATGACCATTTAAGCTCTATAAAAACGATGAGTAATGTAAGTGGGATTGAAAATGTCGATCTTAGTAAT
TTTAACGGCGTAAAAGAAGTAAATTTTCGTGTAGGTGATGATAAAGAATGCTTAAAACTTGTTTTTATAAATAAGGCTGA
TTTTATACTCATGGGAATTTCAAGCAATGAGGCAAGTAAAAATGCTATCATCAACGCAGCCAATCAAAGCCATGAAGATT
TAGAAAATATAGACTTTACAAGCTCTTCTAGCAATAAAGCTTGCGTGATCTTAAGCAAGAATGAAAATTTTAAAAATCTA
GCGAGTAAAACTTATCTTTTAATAGGGGGAATGTAA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsG | Campylobacter jejuni subsp. jejuni 81-176 |
95.322 |
100 |
0.953 |