Detailed information NTG1159613

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: QOR59_RS06975
• Genome accession: NZ_OX460985
• Coordinates: 1367828..1369054 (-)
• Length: 408 a.a.
• NCBI ID: WP_000918412.1
• Uniprot ID: A0AAV3JKF5
• Organism: Streptococcus agalactiae isolate MRI Z2-307
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 1362828..1374054

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QOR59_RS06950	-	1363702..1365078 (-)	1377	WP_000427478.1	amino acid permease	-
QOR59_RS06955	-	1365208..1365858 (-)	651	WP_000120090.1	HXXEE domain-containing protein	-
QOR59_RS06960	-	1366016..1366339 (-)	324	WP_001867206.1	HXXEE domain-containing protein	-
QOR59_RS06965	-	1366611..1367240 (+)	630	WP_000140673.1	TetR/AcrR family transcriptional regulator	-
QOR59_RS06970	yihA	1367221..1367817 (-)	597	WP_000796925.1	ribosome biogenesis GTP-binding protein YihA/YsxC	-
QOR59_RS06975	clpX	1367828..1369054 (-)	1227	WP_000918412.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
QOR59_RS06980	-	1369272..1369766 (-)	495	WP_000166043.1	dihydrofolate reductase	-
QOR59_RS06985	-	1369846..1370685 (-)	840	WP_000158597.1	thymidylate synthase	-
QOR59_RS06990	-	1370839..1372011 (+)	1173	WP_001873466.1	hydroxymethylglutaryl-CoA synthase	-
QOR59_RS06995	-	1372013..1373296 (+)	1284	WP_000161688.1	hydroxymethylglutaryl-CoA reductase, degradative	-
QOR59_RS07000	-	1373388..1373837 (+)	450	WP_001039193.1	DUF1836 domain-containing protein	-

Sequence

Protein

• Length: 408 a.a.
• Molecular weight: 44850.28 Da
• Isoelectric Point: 4.4424

>NTDB_id=1159613 QOR59_RS06975 WP_000918412.1 1367828..1369054(-) (clpX) [Streptococcus agalactiae isolate MRI Z2-307]
MAGNRNNDMNVYCSFCGKSQDEVKKIIAGNGVFICNECVALSQEIIKEELAEEVLADLAEVPKPKELLEILNQYVVGQDR
AKRALAVAVYNHYKRVSYTESSDDDVDLQKSNILMIGPTGSGKTFLAQTLAKSLNVPFAIADATSLTEAGYVGEDVENIL
LKLIQAADYNVERAERGIIYVDEIDKIAKKGENVSITRDVSGEGVQQALLKIIEGTVASVPPQGGRKHPNQEMIQINTKN
ILFIVGGAFDGIEDLVKQRLGEKIIGFGQTSRKIDDNASYMQEIISEDIQKFGLIPEFIGRLPVVAALELLTAEDLVRIL
TEPRNALVKQYQTLLSYDGVELEFDQDALLAIADKAIERKTGARGLRSIIEETMLDIMFEIPSQEDVTKVRITKAAVEGT
DKPVLETA

Nucleotide

• Length: 1227 bp

>NTDB_id=1159613 QOR59_RS06975 WP_000918412.1 1367828..1369054(-) (clpX) [Streptococcus agalactiae isolate MRI Z2-307]
ATGGCTGGGAATCGTAATAACGATATGAATGTCTATTGTTCATTTTGTGGCAAAAGCCAAGATGAAGTAAAAAAAATTAT
TGCAGGTAATGGTGTTTTCATTTGTAATGAATGTGTGGCCTTATCACAAGAAATTATTAAGGAAGAATTAGCTGAGGAAG
TACTTGCTGATTTAGCAGAAGTACCAAAACCTAAGGAACTATTAGAAATATTAAATCAATATGTTGTAGGGCAAGATCGT
GCTAAACGTGCTTTAGCAGTTGCTGTCTACAATCATTACAAGCGTGTTAGTTATACCGAGAGTAGTGACGATGATGTAGA
TTTGCAAAAATCCAACATTTTGATGATTGGTCCAACTGGCTCAGGAAAAACCTTCTTAGCACAAACACTAGCTAAAAGCC
TTAATGTACCGTTTGCTATTGCAGATGCGACTTCATTGACCGAAGCAGGATACGTTGGAGAAGATGTTGAGAATATTCTT
CTTAAATTGATTCAAGCTGCTGATTATAATGTCGAACGTGCTGAGCGTGGTATTATCTACGTTGATGAAATAGATAAAAT
TGCTAAGAAAGGCGAAAATGTTTCTATCACACGTGATGTATCTGGTGAAGGTGTACAGCAAGCCCTTCTTAAAATTATTG
AGGGTACGGTAGCAAGTGTTCCCCCACAGGGTGGGCGTAAACATCCTAACCAAGAAATGATTCAAATTAATACCAAGAAC
ATCCTTTTTATTGTCGGTGGTGCTTTTGATGGTATTGAAGACCTTGTGAAGCAACGTTTAGGCGAAAAAATTATTGGTTT
TGGACAGACAAGCCGCAAAATTGATGACAACGCTTCTTATATGCAAGAGATAATTTCTGAGGATATTCAAAAGTTTGGAC
TGATTCCAGAGTTTATTGGCCGTTTACCAGTAGTTGCAGCGTTAGAACTTCTTACTGCAGAAGATCTGGTTCGTATTCTG
ACAGAACCACGCAATGCTTTGGTTAAACAATACCAAACCTTATTATCTTATGATGGTGTAGAATTGGAATTTGATCAGGA
TGCTCTATTGGCTATCGCTGATAAGGCTATCGAGCGCAAGACTGGTGCACGTGGTTTACGTTCTATTATTGAAGAAACGA
TGCTTGATATCATGTTTGAAATTCCAAGCCAAGAAGATGTAACAAAAGTTCGTATCACAAAGGCTGCTGTTGAGGGTACT
GACAAGCCTGTTTTAGAGACGGCTTAG

Domains

Predicted by InterproScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (311-390)

• ClpX C4-type zinc finger (zf-C4_ClpX) (12-48)

• AAA domain (Cdc48 subfamily) (AAA_2) (109-304)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	90.709	100	0.909
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	58	98.039	0.569