Detailed information    

insolico Bioinformatically predicted

Overview


Name   comZ   Type   Regulator
Locus tag   KJP68_RS06115 Genome accession   NZ_OX419559
Coordinates   1185773..1185964 (+) Length   63 a.a.
NCBI ID   WP_003224559.1    Uniprot ID   G4NWD2
Organism   Bacillus subtilis isolate NRS6099     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context


Location: 1180773..1190964
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KJP68_RS06085 (NRS6099_06035) argF 1181637..1182596 (+) 960 WP_003232980.1 ornithine carbamoyltransferase -
  KJP68_RS06090 (NRS6099_06040) yjzC 1182682..1182861 (+) 180 WP_003245356.1 YjzC family protein -
  KJP68_RS06095 (NRS6099_06045) yjzD 1182907..1183092 (-) 186 WP_003245236.1 DUF2929 domain-containing protein -
  KJP68_RS06100 (NRS6099_06050) - 1183341..1184075 (+) 735 WP_003245223.1 hypothetical protein -
  KJP68_RS06105 (NRS6099_06055) - 1184157..1184714 (+) 558 WP_003232974.1 hypothetical protein -
  KJP68_RS06110 (NRS6099_06060) med 1184805..1185758 (+) 954 WP_003245494.1 transcriptional regulator Med Regulator
  KJP68_RS06115 (NRS6099_06065) comZ 1185773..1185964 (+) 192 WP_003224559.1 ComG operon transcriptional repressor ComZ Regulator
  KJP68_RS06120 (NRS6099_06070) yjzB 1185994..1186233 (-) 240 WP_003232972.1 spore coat protein YjzB -
  KJP68_RS06125 (NRS6099_06075) fabH 1186398..1187336 (+) 939 WP_003232971.1 beta-ketoacyl-ACP synthase III -
  KJP68_RS06130 (NRS6099_06080) fabF 1187359..1188600 (+) 1242 WP_003244890.1 beta-ketoacyl-ACP synthase II -
  KJP68_RS06135 (NRS6099_06085) yjaZ 1188676..1189461 (+) 786 WP_003232967.1 DUF2268 domain-containing protein -
  KJP68_RS06140 (NRS6099_06090) appD 1189653..1190639 (+) 987 WP_003232965.1 oligopeptide ABC transporter ATP-binding protein AppD -

Sequence


Protein


Download         Length: 63 a.a.        Molecular weight: 7214.27 Da        Isoelectric Point: 4.2564

>NTDB_id=1156818 KJP68_RS06115 WP_003224559.1 1185773..1185964(+) (comZ) [Bacillus subtilis isolate NRS6099]
MQHEKSLEFLQIAMKYLPEAKEQLEKSGIELSMEAIQPFMNLFTTVMAEAYELGKSDAKSETE

Nucleotide


Download         Length: 192 bp        

>NTDB_id=1156818 KJP68_RS06115 WP_003224559.1 1185773..1185964(+) (comZ) [Bacillus subtilis isolate NRS6099]
ATGCAGCACGAAAAATCACTTGAATTCTTGCAAATTGCCATGAAATATCTCCCTGAAGCGAAAGAACAGCTTGAGAAATC
AGGCATTGAGCTCTCAATGGAGGCCATCCAGCCGTTTATGAATCTATTTACAACGGTAATGGCGGAAGCTTATGAGCTTG
GCAAGTCTGACGCTAAATCTGAAACAGAATAA

Domains


Predicted by InterproScan.

(4-58)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB G4NWD2

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

100

100

1


Multiple sequence alignment