Detailed information
Bioinformatically predicted
Overview
| Name | vicK | Type | Regulator |
| Locus tag | DQM45_RS06935 | Genome accession | NZ_LS483388 |
| Coordinates | 1400240..1401598 (-) | Length | 452 a.a. |
| NCBI ID | WP_003082933.1 | Uniprot ID | - |
| Organism | Streptococcus porcinus strain NCTC10999 | ||
| Function | repress comCDE expression; repress comX expression (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1395240..1406598
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DQM45_RS06925 (NCTC10999_01411) | rnc | 1398630..1399322 (-) | 693 | WP_003085736.1 | ribonuclease III | - |
| DQM45_RS06930 (NCTC10999_01412) | vicX | 1399427..1400239 (-) | 813 | WP_003084363.1 | MBL fold metallo-hydrolase | Regulator |
| DQM45_RS06935 (NCTC10999_01413) | vicK | 1400240..1401598 (-) | 1359 | WP_003082933.1 | cell wall metabolism sensor histidine kinase VicK | Regulator |
| DQM45_RS06940 (NCTC10999_01414) | vicR | 1401591..1402301 (-) | 711 | WP_003084933.1 | response regulator YycF | Regulator |
| DQM45_RS06945 (NCTC10999_01415) | - | 1402562..1403341 (+) | 780 | WP_003083323.1 | amino acid ABC transporter ATP-binding protein | - |
| DQM45_RS06950 (NCTC10999_01416) | - | 1403354..1404172 (+) | 819 | WP_003083506.1 | transporter substrate-binding domain-containing protein | - |
| DQM45_RS06955 (NCTC10999_01417) | - | 1404190..1404894 (+) | 705 | WP_003085779.1 | amino acid ABC transporter permease | - |
| DQM45_RS06960 (NCTC10999_01418) | - | 1404910..1405557 (+) | 648 | WP_003084630.1 | amino acid ABC transporter permease | - |
Sequence
Protein
Download Length: 452 a.a. Molecular weight: 51707.16 Da Isoelectric Point: 5.0837
>NTDB_id=1139802 DQM45_RS06935 WP_003082933.1 1400240..1401598(-) (vicK) [Streptococcus porcinus strain NCTC10999]
MTRDIVGNLSLFELAILFLLIFVAIYFIYLAVRDYRNAKIIRQMSHKIRDLINGRYTDDINSKADIELIDLSEQLNDLSD
VFRLTHENLAQEKNRLASILAYMSDGVLATDRTGQIMMINETAQKQMNISREEALTKNITDLLGSESPYTYRELVSQTPI
VTINRRDETGEFITLRLRFALNRRESGFISGLVVVLHDTTEQEKEERERRLFVSNVSHELRTPLTSVKSYLEALDEGALK
EDIAPSFIKVSLDETNRMMRMISDLLNLSRIDNQVTALAVEMTNFTAFMTSILNRFDLVRNQNTVAGKTYEIIRDYPIKS
IWLEIDNDKMTQVIENILNNAIKYSPDGGKIRVKMKTTDSQLIISISDQGLGIPKKDLPLIFDRFYRVDKARSRAQGGTG
LGLAIAKEIVKQHKGFIWAKSDYGKGSTFTIVLPYDKDVMSDDVDEWEDDID
MTRDIVGNLSLFELAILFLLIFVAIYFIYLAVRDYRNAKIIRQMSHKIRDLINGRYTDDINSKADIELIDLSEQLNDLSD
VFRLTHENLAQEKNRLASILAYMSDGVLATDRTGQIMMINETAQKQMNISREEALTKNITDLLGSESPYTYRELVSQTPI
VTINRRDETGEFITLRLRFALNRRESGFISGLVVVLHDTTEQEKEERERRLFVSNVSHELRTPLTSVKSYLEALDEGALK
EDIAPSFIKVSLDETNRMMRMISDLLNLSRIDNQVTALAVEMTNFTAFMTSILNRFDLVRNQNTVAGKTYEIIRDYPIKS
IWLEIDNDKMTQVIENILNNAIKYSPDGGKIRVKMKTTDSQLIISISDQGLGIPKKDLPLIFDRFYRVDKARSRAQGGTG
LGLAIAKEIVKQHKGFIWAKSDYGKGSTFTIVLPYDKDVMSDDVDEWEDDID
Nucleotide
Download Length: 1359 bp
>NTDB_id=1139802 DQM45_RS06935 WP_003082933.1 1400240..1401598(-) (vicK) [Streptococcus porcinus strain NCTC10999]
ATGACTAGAGACATTGTTGGAAATTTATCTTTATTTGAATTAGCAATACTCTTCTTATTGATTTTTGTTGCTATCTATTT
TATTTATTTAGCTGTTCGCGATTATCGTAATGCTAAAATTATCAGACAAATGAGTCACAAAATTCGTGATTTGATTAACG
GTCGTTATACTGATGATATTAATAGCAAAGCAGACATTGAATTAATTGACCTATCAGAACAACTTAATGATCTATCAGAT
GTTTTTCGTCTCACCCATGAAAATTTAGCTCAGGAGAAGAATCGTCTGGCTAGCATTTTGGCTTATATGAGTGATGGTGT
TTTAGCGACTGACCGAACTGGTCAGATTATGATGATTAATGAAACAGCACAAAAACAGATGAACATCAGTCGTGAGGAGG
CCCTTACAAAGAATATAACTGATCTTTTGGGTAGTGAATCTCCTTATACTTATAGGGAATTAGTGTCTCAAACACCAATT
GTTACCATAAATCGGCGTGATGAGACAGGCGAATTTATCACATTGCGCTTGCGTTTCGCACTGAATAGACGTGAAAGTGG
CTTTATTTCAGGTTTGGTCGTCGTATTGCACGACACTACTGAACAAGAAAAAGAAGAAAGGGAGCGTCGTCTTTTTGTTT
CCAACGTTAGCCATGAGCTGAGAACTCCTTTGACTTCGGTTAAATCATACCTGGAAGCACTTGATGAGGGAGCCTTAAAA
GAGGACATTGCTCCAAGTTTTATTAAAGTTTCACTTGATGAAACTAATCGGATGATGCGGATGATTTCCGATCTTTTGAA
TTTGTCACGAATAGATAATCAGGTGACAGCGTTAGCCGTTGAGATGACTAACTTTACAGCTTTTATGACCTCAATCTTAA
ATCGATTTGATTTGGTTCGCAACCAAAATACAGTTGCCGGTAAGACATATGAGATAATCCGTGATTATCCCATAAAGTCA
ATTTGGTTAGAAATTGATAATGATAAGATGACCCAGGTCATTGAAAATATTTTAAATAATGCTATTAAATATTCTCCTGA
TGGAGGTAAAATTCGAGTTAAAATGAAAACTACTGATAGCCAGCTAATTATCTCCATTTCTGATCAAGGTTTAGGAATTC
CTAAAAAAGATCTCCCTTTAATTTTCGACCGATTCTATCGTGTTGATAAAGCACGTAGCCGGGCGCAGGGTGGAACAGGA
CTAGGGTTGGCTATTGCAAAAGAGATTGTCAAACAACATAAGGGCTTTATTTGGGCTAAAAGTGATTACGGTAAGGGTTC
GACCTTTACAATTGTTCTTCCTTATGACAAAGATGTGATGTCAGATGATGTTGATGAATGGGAGGACGATATTGATTAA
ATGACTAGAGACATTGTTGGAAATTTATCTTTATTTGAATTAGCAATACTCTTCTTATTGATTTTTGTTGCTATCTATTT
TATTTATTTAGCTGTTCGCGATTATCGTAATGCTAAAATTATCAGACAAATGAGTCACAAAATTCGTGATTTGATTAACG
GTCGTTATACTGATGATATTAATAGCAAAGCAGACATTGAATTAATTGACCTATCAGAACAACTTAATGATCTATCAGAT
GTTTTTCGTCTCACCCATGAAAATTTAGCTCAGGAGAAGAATCGTCTGGCTAGCATTTTGGCTTATATGAGTGATGGTGT
TTTAGCGACTGACCGAACTGGTCAGATTATGATGATTAATGAAACAGCACAAAAACAGATGAACATCAGTCGTGAGGAGG
CCCTTACAAAGAATATAACTGATCTTTTGGGTAGTGAATCTCCTTATACTTATAGGGAATTAGTGTCTCAAACACCAATT
GTTACCATAAATCGGCGTGATGAGACAGGCGAATTTATCACATTGCGCTTGCGTTTCGCACTGAATAGACGTGAAAGTGG
CTTTATTTCAGGTTTGGTCGTCGTATTGCACGACACTACTGAACAAGAAAAAGAAGAAAGGGAGCGTCGTCTTTTTGTTT
CCAACGTTAGCCATGAGCTGAGAACTCCTTTGACTTCGGTTAAATCATACCTGGAAGCACTTGATGAGGGAGCCTTAAAA
GAGGACATTGCTCCAAGTTTTATTAAAGTTTCACTTGATGAAACTAATCGGATGATGCGGATGATTTCCGATCTTTTGAA
TTTGTCACGAATAGATAATCAGGTGACAGCGTTAGCCGTTGAGATGACTAACTTTACAGCTTTTATGACCTCAATCTTAA
ATCGATTTGATTTGGTTCGCAACCAAAATACAGTTGCCGGTAAGACATATGAGATAATCCGTGATTATCCCATAAAGTCA
ATTTGGTTAGAAATTGATAATGATAAGATGACCCAGGTCATTGAAAATATTTTAAATAATGCTATTAAATATTCTCCTGA
TGGAGGTAAAATTCGAGTTAAAATGAAAACTACTGATAGCCAGCTAATTATCTCCATTTCTGATCAAGGTTTAGGAATTC
CTAAAAAAGATCTCCCTTTAATTTTCGACCGATTCTATCGTGTTGATAAAGCACGTAGCCGGGCGCAGGGTGGAACAGGA
CTAGGGTTGGCTATTGCAAAAGAGATTGTCAAACAACATAAGGGCTTTATTTGGGCTAAAAGTGATTACGGTAAGGGTTC
GACCTTTACAATTGTTCTTCCTTATGACAAAGATGTGATGTCAGATGATGTTGATGAATGGGAGGACGATATTGATTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| vicK | Streptococcus mutans UA159 |
72.705 |
91.593 |
0.666 |
| micB | Streptococcus pneumoniae Cp1015 |
64.665 |
95.796 |
0.619 |