Detailed information
Bioinformatically predicted
Overview
| Name | comYH | Type | Machinery gene |
| Locus tag | DQM59_RS01260 | Genome accession | NZ_LS483349 |
| Coordinates | 241105..242058 (+) | Length | 317 a.a. |
| NCBI ID | WP_002264244.1 | Uniprot ID | A0AAX1K2T6 |
| Organism | Streptococcus mutans strain NCTC10449 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 236105..247058
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DQM59_RS01220 (NCTC10449_00231) | - | 236871..237254 (+) | 384 | WP_002264248.1 | DUF1033 family protein | - |
| DQM59_RS01225 (NCTC10449_00232) | comYA | 237384..238325 (+) | 942 | WP_002264247.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| DQM59_RS01230 (NCTC10449_00233) | comYB | 238261..239292 (+) | 1032 | WP_255262721.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| DQM59_RS01235 (NCTC10449_00234) | comYC | 239292..239606 (+) | 315 | WP_002263437.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| DQM59_RS01240 (NCTC10449_00235) | comYD | 239593..239997 (+) | 405 | WP_002264246.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| DQM59_RS01245 (NCTC10449_00236) | comYE | 239969..240262 (+) | 294 | WP_002263439.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| DQM59_RS01250 (NCTC10449_00237) | comYF | 240249..240683 (+) | 435 | WP_002264245.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| DQM59_RS01255 (NCTC10449_00238) | comYG | 240661..241050 (+) | 390 | WP_002263441.1 | competence type IV pilus minor pilin ComGG | Machinery gene |
| DQM59_RS01260 (NCTC10449_00239) | comYH | 241105..242058 (+) | 954 | WP_002264244.1 | class I SAM-dependent methyltransferase | Machinery gene |
| DQM59_RS01265 (NCTC10449_00240) | - | 242117..243316 (+) | 1200 | WP_002263443.1 | acetate kinase | - |
| DQM59_RS01270 (NCTC10449_00241) | - | 243869..244114 (+) | 246 | WP_002263444.1 | helix-turn-helix transcriptional regulator | - |
| DQM59_RS01275 (NCTC10449_00242) | - | 244083..244523 (+) | 441 | WP_002263445.1 | hypothetical protein | - |
| DQM59_RS01280 (NCTC10449_00243) | - | 244576..245238 (+) | 663 | WP_002266816.1 | CPBP family intramembrane glutamic endopeptidase | - |
| DQM59_RS01285 (NCTC10449_00244) | proC | 245324..246094 (-) | 771 | WP_002267840.1 | pyrroline-5-carboxylate reductase | - |
Sequence
Protein
Download Length: 317 a.a. Molecular weight: 36258.54 Da Isoelectric Point: 5.2379
>NTDB_id=1137863 DQM59_RS01260 WP_002264244.1 241105..242058(+) (comYH) [Streptococcus mutans strain NCTC10449]
MDFEKIEAAYNLLLDNCQRLETQLHTHLYDALIEQNACYLGAEGADDFIKENNKKLRQLNLSKEEWRRSFQFIFIKATQS
QQLQSNHQFTPDSIGFIILYLLEGLTNKSQLDIIEIGSGTGNLAETIVNNSSKSIDYMGIEVDDLLIDLSASIADVLDSS
VHFVQEDAVRPQILKESDVIISDLPVGFYPNDKIAQRYQVAAKLGHTYAHHLLMEQSLKYLKKEGLAIFLAPVDLLTSEQ
SPLLKKWLQNNVTILAVISLPEAIFKQKSNIKSIFVLKKQSQQSLESFVYPLTDLQDPEVLRRFMKNFKKWKEDNVF
MDFEKIEAAYNLLLDNCQRLETQLHTHLYDALIEQNACYLGAEGADDFIKENNKKLRQLNLSKEEWRRSFQFIFIKATQS
QQLQSNHQFTPDSIGFIILYLLEGLTNKSQLDIIEIGSGTGNLAETIVNNSSKSIDYMGIEVDDLLIDLSASIADVLDSS
VHFVQEDAVRPQILKESDVIISDLPVGFYPNDKIAQRYQVAAKLGHTYAHHLLMEQSLKYLKKEGLAIFLAPVDLLTSEQ
SPLLKKWLQNNVTILAVISLPEAIFKQKSNIKSIFVLKKQSQQSLESFVYPLTDLQDPEVLRRFMKNFKKWKEDNVF
Nucleotide
Download Length: 954 bp
>NTDB_id=1137863 DQM59_RS01260 WP_002264244.1 241105..242058(+) (comYH) [Streptococcus mutans strain NCTC10449]
ATGGATTTTGAAAAAATAGAAGCTGCCTATAACTTACTGTTAGATAATTGTCAAAGGCTGGAAACTCAACTTCATACTCA
CCTTTATGATGCCTTAATTGAGCAAAATGCTTGCTATCTAGGTGCTGAAGGTGCTGATGATTTTATTAAAGAAAATAATA
AAAAACTGCGTCAGCTTAATCTAAGTAAAGAGGAGTGGCGTCGTAGTTTTCAATTTATTTTTATTAAGGCTACTCAAAGT
CAGCAATTACAGTCAAATCACCAATTTACACCAGATAGTATTGGTTTTATTATTCTTTATTTATTGGAAGGTTTAACAAA
TAAGAGTCAGTTAGACATCATTGAAATTGGTTCTGGGACAGGAAATCTTGCAGAGACTATTGTGAATAACAGTTCAAAAA
GCATTGATTATATGGGGATTGAGGTTGATGATCTGTTAATTGATTTATCAGCAAGTATTGCCGATGTATTGGATTCTTCT
GTGCATTTTGTTCAAGAAGATGCAGTGCGGCCTCAGATTTTAAAAGAAAGTGATGTCATTATCAGTGATCTGCCAGTTGG
CTTTTATCCCAATGATAAAATTGCTCAGCGTTATCAGGTTGCAGCCAAGTTAGGACATACTTATGCACATCATCTTTTGA
TGGAGCAATCGCTTAAGTATTTAAAAAAAGAGGGACTTGCTATTTTTTTAGCGCCAGTGGATCTTTTAACTAGTGAGCAG
AGTCCTTTGCTTAAAAAGTGGTTACAGAACAATGTAACTATTTTAGCCGTTATTTCTTTACCTGAGGCAATTTTTAAACA
GAAAAGTAATATAAAGTCAATCTTTGTCTTAAAGAAACAATCGCAACAAAGTTTGGAAAGTTTTGTCTATCCTTTGACAG
ATTTACAAGACCCCGAAGTTTTAAGACGATTTATGAAAAATTTTAAAAAGTGGAAGGAAGATAATGTCTTTTAA
ATGGATTTTGAAAAAATAGAAGCTGCCTATAACTTACTGTTAGATAATTGTCAAAGGCTGGAAACTCAACTTCATACTCA
CCTTTATGATGCCTTAATTGAGCAAAATGCTTGCTATCTAGGTGCTGAAGGTGCTGATGATTTTATTAAAGAAAATAATA
AAAAACTGCGTCAGCTTAATCTAAGTAAAGAGGAGTGGCGTCGTAGTTTTCAATTTATTTTTATTAAGGCTACTCAAAGT
CAGCAATTACAGTCAAATCACCAATTTACACCAGATAGTATTGGTTTTATTATTCTTTATTTATTGGAAGGTTTAACAAA
TAAGAGTCAGTTAGACATCATTGAAATTGGTTCTGGGACAGGAAATCTTGCAGAGACTATTGTGAATAACAGTTCAAAAA
GCATTGATTATATGGGGATTGAGGTTGATGATCTGTTAATTGATTTATCAGCAAGTATTGCCGATGTATTGGATTCTTCT
GTGCATTTTGTTCAAGAAGATGCAGTGCGGCCTCAGATTTTAAAAGAAAGTGATGTCATTATCAGTGATCTGCCAGTTGG
CTTTTATCCCAATGATAAAATTGCTCAGCGTTATCAGGTTGCAGCCAAGTTAGGACATACTTATGCACATCATCTTTTGA
TGGAGCAATCGCTTAAGTATTTAAAAAAAGAGGGACTTGCTATTTTTTTAGCGCCAGTGGATCTTTTAACTAGTGAGCAG
AGTCCTTTGCTTAAAAAGTGGTTACAGAACAATGTAACTATTTTAGCCGTTATTTCTTTACCTGAGGCAATTTTTAAACA
GAAAAGTAATATAAAGTCAATCTTTGTCTTAAAGAAACAATCGCAACAAAGTTTGGAAAGTTTTGTCTATCCTTTGACAG
ATTTACAAGACCCCGAAGTTTTAAGACGATTTATGAAAAATTTTAAAAAGTGGAAGGAAGATAATGTCTTTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comYH | Streptococcus mutans UA159 |
99.685 |
100 |
0.997 |
| comYH | Streptococcus mutans UA140 |
99.685 |
100 |
0.997 |