Detailed information
Bioinformatically predicted
Overview
| Name | comYH | Type | Machinery gene |
| Locus tag | DQM48_RS00750 | Genome accession | NZ_LS483348 |
| Coordinates | 109928..110884 (+) | Length | 318 a.a. |
| NCBI ID | WP_020915994.1 | Uniprot ID | A0AB33AJ02 |
| Organism | Streptococcus lutetiensis strain NCTC8738 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 104928..115884
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DQM48_RS00710 (NCTC8738_00142) | - | 105829..106197 (+) | 369 | WP_020915986.1 | DUF1033 family protein | - |
| DQM48_RS00715 (NCTC8738_00143) | comYA | 106269..107210 (+) | 942 | WP_020915987.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| DQM48_RS00720 (NCTC8738_00144) | comYB | 107134..108177 (+) | 1044 | WP_020915988.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| DQM48_RS00725 (NCTC8738_00145) | comYC | 108177..108470 (+) | 294 | WP_020915989.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| DQM48_RS00730 (NCTC8738_00146) | comYD | 108454..108885 (+) | 432 | WP_020915990.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| DQM48_RS00735 (NCTC8738_00147) | comYE | 108839..109132 (+) | 294 | WP_020915991.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| DQM48_RS00740 (NCTC8738_00148) | comYF | 109116..109553 (+) | 438 | WP_043894883.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| DQM48_RS00745 (NCTC8738_00149) | comGG | 109525..109938 (+) | 414 | WP_231872460.1 | competence type IV pilus minor pilin ComGG | - |
| DQM48_RS00750 (NCTC8738_00150) | comYH | 109928..110884 (+) | 957 | WP_020915994.1 | class I SAM-dependent methyltransferase | Machinery gene |
| DQM48_RS00755 (NCTC8738_00151) | - | 110938..112137 (+) | 1200 | WP_020915995.1 | acetate kinase | - |
| DQM48_RS00760 (NCTC8738_00152) | - | 112297..112494 (+) | 198 | WP_020915996.1 | helix-turn-helix transcriptional regulator | - |
| DQM48_RS00765 (NCTC8738_00153) | - | 112511..112711 (+) | 201 | WP_111699164.1 | hypothetical protein | - |
| DQM48_RS00770 (NCTC8738_00154) | - | 112712..113167 (+) | 456 | WP_231853254.1 | ABC transporter permease | - |
| DQM48_RS00775 (NCTC8738_00155) | - | 113182..113817 (+) | 636 | WP_043894885.1 | CPBP family intramembrane glutamic endopeptidase | - |
| DQM48_RS00780 (NCTC8738_00156) | proC | 113854..114624 (-) | 771 | WP_020916000.1 | pyrroline-5-carboxylate reductase | - |
| DQM48_RS00785 (NCTC8738_00157) | pepA | 114686..115753 (-) | 1068 | WP_020916001.1 | glutamyl aminopeptidase | - |
Sequence
Protein
Download Length: 318 a.a. Molecular weight: 35938.07 Da Isoelectric Point: 4.4591
>NTDB_id=1137802 DQM48_RS00750 WP_020915994.1 109928..110884(+) (comYH) [Streptococcus lutetiensis strain NCTC8738]
MNFEKIETAYGLILENIQLIENELKTHIYDALIEQNSFYLGAEGANETVAANNEKLRQLDLTKEEWRRAFQFIFIKAAQT
EALQANHQFTPDAIGFILMFLIENLTASKELDVLEIGSGTGNLAQTLLNNSSKDLNYLGIEVDDLLIDLSASIAEVMDSK
AQFIQEDAVRPQILKESDVIISDLPVGFYPNDEIAKRYKVASSEEHTYAHHLLMEQSLKYLKKDGIAVFLAPVSLLTSKQ
SDLLKAWLKDYADVIAVITLPEPIFGNAANAKSIFVLKKQAEHTPETFVYPLADLQSREVLTDFIEKFKKWNVENMIF
MNFEKIETAYGLILENIQLIENELKTHIYDALIEQNSFYLGAEGANETVAANNEKLRQLDLTKEEWRRAFQFIFIKAAQT
EALQANHQFTPDAIGFILMFLIENLTASKELDVLEIGSGTGNLAQTLLNNSSKDLNYLGIEVDDLLIDLSASIAEVMDSK
AQFIQEDAVRPQILKESDVIISDLPVGFYPNDEIAKRYKVASSEEHTYAHHLLMEQSLKYLKKDGIAVFLAPVSLLTSKQ
SDLLKAWLKDYADVIAVITLPEPIFGNAANAKSIFVLKKQAEHTPETFVYPLADLQSREVLTDFIEKFKKWNVENMIF
Nucleotide
Download Length: 957 bp
>NTDB_id=1137802 DQM48_RS00750 WP_020915994.1 109928..110884(+) (comYH) [Streptococcus lutetiensis strain NCTC8738]
ATGAATTTTGAAAAAATCGAAACAGCTTACGGGCTGATTCTAGAAAATATACAGTTAATCGAAAATGAGTTGAAAACACA
CATTTACGATGCTCTTATTGAACAAAACTCTTTTTATCTTGGTGCTGAAGGTGCCAATGAGACAGTAGCTGCTAATAATG
AAAAACTACGCCAACTTGATTTAACTAAAGAAGAATGGCGTCGTGCTTTTCAGTTTATTTTTATTAAAGCTGCTCAAACA
GAAGCACTTCAGGCAAATCACCAATTTACACCTGATGCAATTGGCTTTATCTTAATGTTCCTTATTGAGAATTTGACAGC
TTCAAAAGAACTTGATGTTTTAGAAATTGGTAGCGGAACAGGTAACCTTGCACAAACCTTGCTCAATAATTCATCTAAAG
ACTTGAATTACCTTGGAATTGAAGTTGATGATTTGTTGATTGACTTGTCAGCAAGTATTGCCGAAGTGATGGATTCTAAA
GCTCAGTTCATTCAAGAAGATGCTGTGCGCCCACAGATTCTTAAGGAAAGTGACGTCATCATCAGTGACCTTCCAGTCGG
CTTCTATCCCAATGATGAAATTGCAAAACGCTACAAAGTAGCAAGCAGTGAAGAACACACTTATGCGCATCATTTGTTGA
TGGAACAATCTCTCAAATATCTCAAAAAAGATGGTATTGCTGTCTTTTTAGCACCGGTTAGTCTTTTGACAAGTAAACAA
AGTGATTTGTTAAAGGCATGGTTGAAGGATTACGCTGATGTTATTGCGGTGATTACTTTACCAGAACCTATTTTCGGCAA
TGCGGCCAATGCTAAGTCAATTTTTGTCTTGAAGAAACAGGCTGAACATACTCCAGAAACATTTGTTTACCCGCTTGCTG
ACTTGCAAAGTCGCGAAGTTTTAACAGATTTTATTGAGAAATTTAAAAAATGGAATGTTGAAAATATGATTTTTTAA
ATGAATTTTGAAAAAATCGAAACAGCTTACGGGCTGATTCTAGAAAATATACAGTTAATCGAAAATGAGTTGAAAACACA
CATTTACGATGCTCTTATTGAACAAAACTCTTTTTATCTTGGTGCTGAAGGTGCCAATGAGACAGTAGCTGCTAATAATG
AAAAACTACGCCAACTTGATTTAACTAAAGAAGAATGGCGTCGTGCTTTTCAGTTTATTTTTATTAAAGCTGCTCAAACA
GAAGCACTTCAGGCAAATCACCAATTTACACCTGATGCAATTGGCTTTATCTTAATGTTCCTTATTGAGAATTTGACAGC
TTCAAAAGAACTTGATGTTTTAGAAATTGGTAGCGGAACAGGTAACCTTGCACAAACCTTGCTCAATAATTCATCTAAAG
ACTTGAATTACCTTGGAATTGAAGTTGATGATTTGTTGATTGACTTGTCAGCAAGTATTGCCGAAGTGATGGATTCTAAA
GCTCAGTTCATTCAAGAAGATGCTGTGCGCCCACAGATTCTTAAGGAAAGTGACGTCATCATCAGTGACCTTCCAGTCGG
CTTCTATCCCAATGATGAAATTGCAAAACGCTACAAAGTAGCAAGCAGTGAAGAACACACTTATGCGCATCATTTGTTGA
TGGAACAATCTCTCAAATATCTCAAAAAAGATGGTATTGCTGTCTTTTTAGCACCGGTTAGTCTTTTGACAAGTAAACAA
AGTGATTTGTTAAAGGCATGGTTGAAGGATTACGCTGATGTTATTGCGGTGATTACTTTACCAGAACCTATTTTCGGCAA
TGCGGCCAATGCTAAGTCAATTTTTGTCTTGAAGAAACAGGCTGAACATACTCCAGAAACATTTGTTTACCCGCTTGCTG
ACTTGCAAAGTCGCGAAGTTTTAACAGATTTTATTGAGAAATTTAAAAAATGGAATGTTGAAAATATGATTTTTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comYH | Streptococcus mutans UA140 |
68.354 |
99.371 |
0.679 |
| comYH | Streptococcus mutans UA159 |
68.038 |
99.371 |
0.676 |