Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | DQL82_RS08125 | Genome accession | NZ_LS483319 |
| Coordinates | 1533620..1533919 (+) | Length | 99 a.a. |
| NCBI ID | WP_172449598.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain NCTC13140 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1528620..1538919
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DQL82_RS08085 | - | 1528681..1528884 (+) | 204 | WP_000087561.1 | YqgQ family protein | - |
| DQL82_RS08090 (NCTC13140_01508) | - | 1528881..1529867 (+) | 987 | WP_000161314.1 | ROK family glucokinase | - |
| DQL82_RS08095 (NCTC13140_01509) | - | 1529867..1530196 (+) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| DQL82_RS08100 (NCTC13140_01510) | - | 1530193..1530816 (+) | 624 | WP_111759442.1 | MBL fold metallo-hydrolase | - |
| DQL82_RS08105 (NCTC13140_01511) | comGA | 1530868..1531842 (+) | 975 | WP_000697228.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| DQL82_RS08110 (NCTC13140_01512) | comGB | 1531814..1532884 (+) | 1071 | WP_000775708.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| DQL82_RS08115 (NCTC13140_01513) | comGC | 1532898..1533209 (+) | 312 | WP_000472256.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| DQL82_RS08120 (NCTC13140_01514) | comGD | 1533187..1533633 (+) | 447 | WP_001790850.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| DQL82_RS08125 (NCTC13140_01515) | comGE | 1533620..1533919 (+) | 300 | WP_172449598.1 | competence protein ComGE | Machinery gene |
| DQL82_RS08130 (NCTC13140_01516) | comGF | 1533837..1534334 (+) | 498 | WP_001789864.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| DQL82_RS08135 | - | 1534431..1534577 (+) | 147 | WP_001789879.1 | hypothetical protein | - |
| DQL82_RS08140 | - | 1534567..1535091 (+) | 525 | WP_001015117.1 | shikimate kinase | - |
| DQL82_RS08145 (NCTC13140_01518) | gcvT | 1535250..1536341 (+) | 1092 | WP_000093349.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| DQL82_RS08150 (NCTC13140_01519) | gcvPA | 1536361..1537707 (+) | 1347 | WP_000019687.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11153.24 Da Isoelectric Point: 10.0111
>NTDB_id=1136263 DQL82_RS08125 WP_172449598.1 1533620..1533919(+) (comGE) [Staphylococcus aureus strain NCTC13140]
MKSYKYKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
MKSYKYKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
Nucleotide
Download Length: 300 bp
>NTDB_id=1136263 DQL82_RS08125 WP_172449598.1 1533620..1533919(+) (comGE) [Staphylococcus aureus strain NCTC13140]
ATGAAAAGCTATAAGTATAAAGGTTCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
ATGAAAAGCTATAAGTATAAAGGTTCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Staphylococcus aureus MW2 |
85.965 |
100 |
0.99 |
| comGE | Staphylococcus aureus N315 |
97.98 |
100 |
0.98 |