Detailed information NTG1128025

Bioinformatically predicted

Overview

• Name: ssbA
• Type: Machinery gene
• Locus tag: FGL20_RS00775
• Genome accession: NZ_LR594050
• Coordinates: 118632..119027 (+)
• Length: 131 a.a.
• NCBI ID: WP_093959147.1
• Uniprot ID: A0A4V0GXR2
• Organism: Streptococcus porcinus strain NCTC10925
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 113632..124027

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FGL20_RS00735 (NCTC10925_00151)	-	113634..113843 (+)	210	WP_093959144.1	helix-turn-helix transcriptional regulator	-
FGL20_RS00740 (NCTC10925_00152)	-	113840..114292 (+)	453	WP_093959145.1	hypothetical protein	-
FGL20_RS00745 (NCTC10925_00153)	-	114304..114945 (+)	642	WP_093959146.1	CPBP family intramembrane glutamic endopeptidase	-
FGL20_RS00750 (NCTC10925_00154)	proC	114995..115765 (-)	771	WP_003085990.1	pyrroline-5-carboxylate reductase	-
FGL20_RS00755 (NCTC10925_00155)	pepA	115783..116850 (-)	1068	WP_003083897.1	glutamyl aminopeptidase	-
FGL20_RS00760 (NCTC10925_00156)	-	117046..117333 (+)	288	WP_003084445.1	DUF4651 domain-containing protein	-
FGL20_RS00765 (NCTC10925_00157)	-	117326..117643 (+)	318	WP_003082874.1	thioredoxin family protein	-
FGL20_RS00770 (NCTC10925_00158)	ytpR	117661..118287 (+)	627	WP_003085847.1	YtpR family tRNA-binding protein	-
FGL20_RS00775 (NCTC10925_00160)	ssbA	118632..119027 (+)	396	WP_093959147.1	single-stranded DNA-binding protein	Machinery gene
FGL20_RS00780 (NCTC10925_00161)	-	119497..120453 (+)	957	WP_093959148.1	ABC transporter substrate-binding protein	-
FGL20_RS00785 (NCTC10925_00162)	-	120469..121431 (+)	963	WP_003085535.1	ABC transporter substrate-binding protein	-
FGL20_RS00790 (NCTC10925_00163)	-	121449..122333 (+)	885	WP_003083454.1	ABC transporter permease	-
FGL20_RS00795 (NCTC10925_00164)	-	122342..123145 (+)	804	WP_003083252.1	ABC transporter ATP-binding protein	-
FGL20_RS00800 (NCTC10925_00165)	-	123234..123875 (-)	642	WP_093959149.1	deoxynucleoside kinase	-

Sequence

Protein

• Length: 131 a.a.
• Molecular weight: 14990.27 Da
• Isoelectric Point: 7.7422

>NTDB_id=1128025 FGL20_RS00775 WP_093959147.1 118632..119027(+) (ssbA) [Streptococcus porcinus strain NCTC10925]
MYNKVIMIGRLVNHPDLIKTPKDKHVCRVSIAVNRRFKNAEGERQVDFVNLVLWGRLAESMASYGSKGGLISLDGELRIR
KYEKDGKTAYMTEVLCQSYQLLESRAQRAVRENNLTDDLCDLVLDEEALPF

Nucleotide

• Length: 396 bp

>NTDB_id=1128025 FGL20_RS00775 WP_093959147.1 118632..119027(+) (ssbA) [Streptococcus porcinus strain NCTC10925]
ATGTATAATAAAGTAATCATGATTGGTCGATTAGTTAACCATCCCGACTTGATAAAGACCCCAAAAGATAAGCATGTGTG
CCGAGTTTCAATTGCTGTCAATCGCCGTTTTAAAAATGCTGAAGGTGAGCGTCAAGTTGATTTTGTTAATCTTGTTCTTT
GGGGACGATTGGCTGAAAGCATGGCTTCGTATGGTAGCAAAGGTGGTCTGATTTCGCTTGATGGTGAGTTACGCATCCGC
AAGTACGAAAAAGATGGTAAGACGGCTTATATGACCGAAGTCCTATGCCAATCTTATCAACTTTTAGAGAGTCGAGCTCA
GCGGGCTGTTAGAGAAAACAACCTGACTGACGACCTTTGTGATTTGGTTTTAGATGAAGAGGCCTTACCTTTCTAA

Domains

Predicted by InterproScan.

• Single-strand binding protein family (SSB) (3-101)

3D structure

• AlphaFold DB: A0A4V0GXR2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ssbA	Streptococcus mutans UA159	74.046	100	0.74
ssbB/cilA	Streptococcus pneumoniae Rx1	67.176	100	0.672
ssbB/cilA	Streptococcus pneumoniae D39	67.176	100	0.672
ssbB/cilA	Streptococcus pneumoniae R6	67.176	100	0.672
ssbB/cilA	Streptococcus mitis NCTC 12261	67.176	100	0.672
ssbB	Streptococcus sobrinus strain NIDR 6715-7	66.412	100	0.664
ssbB/cilA	Streptococcus pneumoniae TIGR4	66.412	100	0.664
ssbB/cilA	Streptococcus mitis SK321	65.649	100	0.656
ssbB	Lactococcus lactis subsp. cremoris KW2	52.679	85.496	0.45
ssb	Latilactobacillus sakei subsp. sakei 23K	42.478	86.26	0.366